TGatter / LazyB
Economic Genome Assembly from Low Coverage Illumina and Nanopore Data
☆19Updated 2 years ago
Alternatives and similar repositories for LazyB:
Users that are interested in LazyB are comparing it to the libraries listed below
- Scaffolding with assembly likelihood optimization☆20Updated 4 years ago
- A comparative genome scaffolding tool☆17Updated 6 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Convert HAL to VG☆21Updated 5 months ago
- ☆15Updated 4 years ago
- WGS (Wheat) Robust Assembly Pipeline☆22Updated 3 years ago
- ☆20Updated 2 years ago
- ☆15Updated 7 years ago
- Find Unique genomic Regions☆29Updated 3 weeks ago
- Genome assembly soft-masking using Red (REpeat Detector)☆15Updated 6 years ago
- transposable element typing pipeline☆17Updated 10 months ago
- assembly evaluation tool☆34Updated 2 years ago
- a broadly applicable tool for automated gene identification and retrieval☆30Updated last month
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- Generating UTRs from SHort Reads☆11Updated 4 years ago
- Scaffolding with Ultralong Reads☆15Updated 4 years ago
- Annotated Genome Optimization Using Transcriptome Information☆19Updated 4 years ago
- Phasing for metagenomics using PacBio long reads☆17Updated 3 years ago
- An algorithm for centromere assembly using long error-prone reads☆26Updated 3 years ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆14Updated last year
- Statistics and analysis for variation graphs☆33Updated last month
- ☆17Updated 3 months ago
- ☆20Updated 5 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆35Updated last month
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 4 years ago
- This tool is for users to upgrade their metagenomics assemblies using long reads. This includes fixing mis-assemblies and scaffolding/gap…☆13Updated 8 years ago
- Convergent substitution detection tool based on the PCOC model☆30Updated 3 years ago
- Identification of segmental duplications in the genome☆26Updated 2 years ago
- Tool for decomposition centromeric assemblies and long reads into monomers☆35Updated 2 years ago
- the pangenome graph evaluator☆24Updated 3 years ago