mmcguffi / pLannotateLinks
Webserver and command line tool for annotating engineered plasmids
☆121Updated 3 months ago
Alternatives and similar repositories for pLannotate
Users that are interested in pLannotate are comparing it to the libraries listed below
Sorting:
- Logan Unitigs and Contigs☆132Updated 3 weeks ago
- ☆129Updated 9 months ago
- RNA secondary structure/sequence profiles for homology search and alignment☆110Updated 6 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆130Updated 6 months ago
- Python library to visualize circular plasmid maps☆26Updated 3 years ago
- Nanopore Plasmid Sequencing☆32Updated last year
- Bioinformatics tool for Locus Visualisation☆106Updated 3 weeks ago
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆101Updated last year
- Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…☆244Updated last month
- Download files from NCBI Entrez by accession☆123Updated 9 months ago
- Phage Annotation using Protein Structures☆109Updated last month
- Fast and flexible ORF finder☆69Updated 3 years ago
- sensitive and precise assembly of short sequencing reads☆155Updated 7 months ago
- breseq is a computational pipeline for finding mutations relative to a reference sequence in short-read DNA resequencing data. It is inte…☆162Updated 2 weeks ago
- Similarity networks of biosynthetic gene clusters☆115Updated this week
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆57Updated 10 months ago
- What should perfect bioinformatic tools be like?☆125Updated 3 weeks ago
- snakemake pipeline for creating trees from sequence sets☆79Updated 2 weeks ago
- A brief, quick and dirty introduction to Sequence Similarity Networks☆21Updated 2 years ago
- nucleic acid folding☆92Updated 10 months ago
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆140Updated last week
- Multi-class signal peptide prediction and structure decoding model.☆85Updated 4 months ago
- Simple oligo analysis and primer design☆176Updated 2 weeks ago
- A Python project to read and write Snapgene *.dna into dict, json, and biopython object.☆41Updated 4 years ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆36Updated 9 months ago
- antiSMASH☆209Updated last week
- Pipeline for metabolic annotation of microbial genomes☆147Updated 2 months ago
- a pipeline to build similarity maps of protein space☆34Updated 5 months ago
- MGnify genome analysis pipeline☆106Updated last week
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆61Updated 6 months ago