Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.
β32Apr 9, 2025Updated last year
Alternatives and similar repositories for Primavera
Users that are interested in Primavera are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- π« Computer-aided DNA assembly validation and identification from restriction digests.β15May 29, 2025Updated last year
- Predict DNA assembly clone validity rates - powered by Kappaβ10Jul 24, 2020Updated 5 years ago
- Batch domestication of genetic parts with Pythonβ16May 12, 2025Updated last year
- Find common blocks and differences between DNA sequencesβ45Nov 5, 2025Updated 7 months ago
- A route planner for DNA assemblyβ37May 12, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- πΊ Plot DNA digestion band patterns with Pythonβ20May 12, 2025Updated last year
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assembliesβ66May 12, 2025Updated last year
- Draw genetic elements with HTML & CSSβ17May 6, 2026Updated last month
- ποΈ The EGF Collection of Useful Bio Apps - Web demos of EGF softwareβ20Dec 10, 2022Updated 3 years ago
- π¨ Python library to plot multi-part genetic constructsβ26Apr 9, 2025Updated last year
- DNA overhang misannealing data for Pythonβ13May 15, 2025Updated last year
- Short overhangs design for DNA assemblyβ15Jun 8, 2022Updated 4 years ago
- Easily download genomes and build BLAST/Bowtie indexes in Pythonβ22Sep 30, 2022Updated 3 years ago
- Generate identicons for DNA sequences with Pythonβ38May 8, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Toolkit for Modelling and Simulation of Gene Expressions and Metabolismβ13Apr 1, 2026Updated 3 months ago
- Read DNA sequences from colourful Microsoft Word documentsβ34May 12, 2025Updated last year
- A versatile DNA sequence optimizerβ274Nov 5, 2025Updated 7 months ago
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQβ11Sep 19, 2017Updated 8 years ago
- Core library and basic plug-ins for the Amyris Genotype Specification Language (GSL) compiler.β24Apr 5, 2023Updated 3 years ago
- An amino acid sequence annotatorβ17May 15, 2025Updated last year
- Metagenomic search for novel CRISPR-transposonsβ12Sep 30, 2021Updated 4 years ago
- Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.β26Feb 13, 2025Updated last year
- Efficiently keep track of changes to genomesβ38Jul 22, 2024Updated last year
- GPUs on demand by Runpod - Special Offer Available β’ AdRun AI, ML, and HPC workloads on powerful cloud GPUsβwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Python library to plot DNA sequence features (e.g. from Genbank files)β691Jul 2, 2025Updated last year
- β17Feb 19, 2026Updated 4 months ago
- Cello v2 is the continuation of the Cello genetic circuit design software.β74May 16, 2022Updated 4 years ago
- Sequencing analysis pipelineβ15Dec 12, 2025Updated 6 months ago
- in silico plasmid extractionβ13Sep 18, 2017Updated 8 years ago
- General low-level APIβ50Jul 18, 2022Updated 3 years ago
- Web based Registry platform for managing synthetic biological partsβ44May 16, 2024Updated 2 years ago
- A Python package for gene network analysisβ33Jun 22, 2022Updated 4 years ago
- This project contains simple methods to measure sample relatedness and identify potential swaps and contaminationβ10Jan 8, 2016Updated 10 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Module for reading ABI Sanger sequencing trace filesβ38Jun 15, 2016Updated 10 years ago
- Confirming specific taxonomic groups within your samples.β19Dec 21, 2020Updated 5 years ago
- C++ implementation of SBOL 2.3.2β17Oct 13, 2020Updated 5 years ago
- Classify sequencing reads using MinHash.β48Apr 6, 2020Updated 6 years ago
- Pathogenicity prediction of bacterial genomesβ17Jun 27, 2018Updated 8 years ago
- Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq dataβ16Apr 2, 2024Updated 2 years ago
- A visualization tool to support reviewing the scientific literatureβ14Jun 2, 2018Updated 8 years ago