Alternatives and similar repositories for seqviz:

Users that are interested in seqviz are comparing it to the libraries listed below

• pydna-group / pydna
  Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…
  ☆176Updated 2 weeks ago
• GMOD / jbrowse-components
  Source code for JBrowse 2, a modern React-based genome browser
  ☆230Updated this week
• rcedgar / muscle
  Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…
  ☆238Updated 3 months ago
• bionumpy / bionumpy
  Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
  ☆280Updated this week
• KosinskiLab / AlphaPulldown
  ☆260Updated this week
• mmcguffi / pLannotate
  Webserver and command line tool for annotating engineered plasmids
  ☆114Updated 3 weeks ago
• calipho-sib / feature-viewer
  Library to visualize protein sequence features in javascript using D3 - From SIB CALIPHO group; neXtProt project
  ☆112Updated 6 months ago
• Lattice-Automation / seqfold
  nucleic acid folding
  ☆91Updated 7 months ago
• jbkinney / logomaker
  Software for the visualization of sequence-function relationships
  ☆195Updated last week
• pinellolab / CRISPResso2
  Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
  ☆296Updated this week
• debbiemarkslab / EVcouplings
  Evolutionary couplings from protein and RNA sequence alignments
  ☆259Updated 3 weeks ago
• primer3-org / primer3
  Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).
  ☆245Updated 5 months ago
• EddyRivasLab / hmmer
  HMMER: biological sequence analysis using profile HMMs
  ☆339Updated 2 months ago
• moshi4 / pyGenomeViz
  A genome visualization python package for comparative genomics
  ☆318Updated 2 months ago
• Edinburgh-Genome-Foundry / DnaFeaturesViewer
  Python library to plot DNA sequence features (e.g. from Genbank files)
  ☆620Updated 2 months ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆77Updated this week
• iGEM-Engineering / iGEM-distribution
  Repository for collective design of an iGEM DNA distribution
  ☆43Updated last year
• gecrooks / weblogo
  WebLogo 3: Sequence Logos redrawn
  ☆149Updated 3 months ago
• pachterlab / ffq
  A tool to find sequencing data and metadata from public databases.
  ☆569Updated 7 months ago
• google-research / proteinfer
  Deep networks for protein functional inference
  ☆168Updated 2 weeks ago
• ViennaRNA / ViennaRNA
  The ViennaRNA Package
  ☆326Updated 5 months ago
• steineggerlab / foldmason
  Multiple Protein Structure Alignment at Scale with FoldMason
  ☆164Updated this week
• libnano / primer3-py
  Simple oligo analysis and primer design
  ☆176Updated last month
• gamcil / clinker
  Gene cluster comparison figure generator
  ☆558Updated 4 months ago
• antismash / antismash
  antiSMASH
  ☆197Updated last week
• Edinburgh-Genome-Foundry / DnaChisel
  A versatile DNA sequence optimizer
  ☆231Updated last month
• VoigtLab / dnaplotlib
  DNA plotting library for Python
  ☆292Updated last year
• ebi-webcomponents / nightingale
  Data visualisation web components for the life sciences.
  ☆128Updated last week
• songlab-cal / gpn
  Genomic Pre-trained Network
  ☆254Updated last week
• SynBioDex / pySBOL3
  Native python implementation of SBOL 3.0 specification
  ☆38Updated this week