Edinburgh-Genome-Foundry / DnaChiselLinks
A versatile DNA sequence optimizer
☆237Updated 3 weeks ago
Alternatives and similar repositories for DnaChisel
Users that are interested in DnaChisel are comparing it to the libraries listed below
Sorting:
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆180Updated 2 weeks ago
- Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)☆156Updated 8 months ago
- WebLogo 3: Sequence Logos redrawn☆151Updated 3 weeks ago
- Unified biological sequence manipulation in Python☆207Updated 11 months ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆58Updated 3 weeks ago
- HMMER: biological sequence analysis using profile HMMs☆365Updated 4 months ago
- A Python framework for structural systems biology☆107Updated 4 years ago
- antiSMASH☆209Updated last week
- nucleic acid folding☆92Updated 10 months ago
- Python bindings for the parasail C library.☆101Updated 9 months ago
- Software for the visualization of sequence-function relationships☆198Updated 2 months ago
- Evolutionary couplings from protein and RNA sequence alignments☆267Updated 3 months ago
- A route planner for DNA assembly☆33Updated 3 weeks ago
- Cython bindings and Python interface to HMMER3.☆136Updated 3 weeks ago
- Codon usage tables in code-friendly format + Python bindings☆37Updated 3 weeks ago
- Deep networks for protein functional inference☆172Updated 2 months ago
- Multiple Protein Structure Alignment at Scale with FoldMason☆174Updated last month
- General low-level API☆50Updated 2 years ago
- Create force-directed graphs of RNA secondary structures.☆103Updated 5 years ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆176Updated 2 months ago
- Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.☆377Updated last year
- Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…☆244Updated last month
- Protein structure comparison tools such as SSAP and SNAP☆64Updated last year
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆301Updated last week
- Protein 3D structure prediction pipeline☆80Updated this week
- Automatic oligonucleotide design for PCR-based gene synthesis☆46Updated 5 years ago
- a JavaScript DNA, RNA, and protein sequence viewer☆277Updated 5 months ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆44Updated last week
- Models, design algorithms, and other software related to Salis lab publications☆32Updated 7 months ago
- snakemake pipeline for creating trees from sequence sets☆79Updated 2 weeks ago