Edinburgh-Genome-Foundry / DnaChiselLinks
A versatile DNA sequence optimizer
☆256Updated last month
Alternatives and similar repositories for DnaChisel
Users that are interested in DnaChisel are comparing it to the libraries listed below
Sorting:
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆209Updated last week
- Software for the visualization of sequence-function relationships☆206Updated 6 months ago
- Unified biological sequence manipulation in Python☆207Updated last year
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆63Updated 6 months ago
- A Python framework for structural systems biology☆110Updated 5 years ago
- General low-level API☆50Updated 3 years ago
- nucleic acid folding☆108Updated 3 months ago
- Deep networks for protein functional inference☆180Updated last week
- The consensus GEM for Saccharomyces cerevisiae☆114Updated last week
- WebLogo 3: Sequence Logos redrawn☆152Updated 7 months ago
- Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)☆213Updated 4 months ago
- Protein 3D structure prediction pipeline☆90Updated 3 weeks ago
- HMMER: biological sequence analysis using profile HMMs☆389Updated 2 months ago
- A route planner for DNA assembly☆36Updated 6 months ago
- Cython bindings and Python interface to HMMER3.☆151Updated this week
- Webserver and command line tool for annotating engineered plasmids☆134Updated 4 months ago
- Protein structure comparison tools such as SSAP and SNAP☆66Updated 2 years ago
- cameo - computer aided metabolic engineering & optimization☆122Updated 3 years ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆168Updated last year
- Native python implementation of SBOL 3.0 specification☆42Updated 8 months ago
- Models, design algorithms, and other software related to Salis lab publications☆35Updated last year
- The ViennaRNA Package☆374Updated this week
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources☆45Updated this week
- The BiGG Models website server☆85Updated 6 years ago
- Data visualisation web components for the life sciences.☆138Updated last month
- Create force-directed graphs of RNA secondary structures.☆110Updated 5 years ago
- Codon usage tables in code-friendly format + Python bindings☆40Updated 7 months ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆179Updated this week
- Automatic oligonucleotide design for PCR-based gene synthesis☆49Updated 2 weeks ago
- A machine learning tool to improve the effectiveness of strain engineering in synthetic biology☆59Updated this week