Easily download genomes and build BLAST/Bowtie indexes in Python
☆22Sep 30, 2022Updated 3 years ago
Alternatives and similar repositories for genome_collector
Users that are interested in genome_collector are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Batch domestication of genetic parts with Python☆16May 12, 2025Updated last year
- Read DNA sequences from colourful Microsoft Word documents☆34May 12, 2025Updated last year
- DNA overhang misannealing data for Python☆13May 15, 2025Updated last year
- An amino acid sequence annotator☆17May 15, 2025Updated last year
- 🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software☆20Dec 10, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A route planner for DNA assembly☆37May 12, 2025Updated last year
- Short overhangs design for DNA assembly☆15Jun 8, 2022Updated 4 years ago
- Predict DNA assembly clone validity rates - powered by Kappa☆10Jul 24, 2020Updated 5 years ago
- Draw genetic elements with HTML & CSS☆17May 6, 2026Updated 2 months ago
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆15May 29, 2025Updated last year
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆46May 13, 2026Updated last month
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆66May 12, 2025Updated last year
- 🎨 Python library to plot multi-part genetic constructs☆26Apr 9, 2025Updated last year
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆32Apr 9, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Find common blocks and differences between DNA sequences☆45Nov 5, 2025Updated 8 months ago
- Generate identicons for DNA sequences with Python☆38May 8, 2025Updated last year
- A versatile DNA sequence optimizer☆274Nov 5, 2025Updated 8 months ago
- A Python molecular biology CAD tool with a dead-simple user interface☆13Dec 8, 2022Updated 3 years ago
- Computer-Aided Process Planner (CAPP) for Synthetic Biology Research☆11Jun 1, 2021Updated 5 years ago
- **PLEASE NOTE: Due to lack of funding Leaf LIMS is no longer being developed/updated**. Set up Leaf LIMS on your own system.☆31May 22, 2018Updated 8 years ago
- Toolkit for Modelling and Simulation of Gene Expressions and Metabolism☆13Apr 1, 2026Updated 3 months ago
- ☆26Apr 2, 2026Updated 3 months ago
- Ginkgo SARS-CoV-2 synthesis efforts: overviews and data☆13Jun 7, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Sequencing analysis pipeline☆15Dec 12, 2025Updated 6 months ago
- General low-level API☆50Jul 18, 2022Updated 3 years ago
- Codon usage tables in code-friendly format + Python bindings☆43May 9, 2025Updated last year
- The friendly Computational App Boilerplate. Django + Vue.JS + Redis queues + NginX☆22Jun 10, 2021Updated 5 years ago
- Core library and basic plug-ins for the Amyris Genotype Specification Language (GSL) compiler.☆24Apr 5, 2023Updated 3 years ago
- A pure Python implementation of the SBOL standard.☆21Feb 13, 2025Updated last year
- Online tool for comparing prices and feasibility of DNA synthesis☆22Mar 2, 2023Updated 3 years ago
- Python library to plot DNA sequence features (e.g. from Genbank files)☆693Jul 2, 2025Updated last year
- Web based Registry platform for managing synthetic biological parts☆44May 16, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Enzyme-constrained genome-scale models in python☆38Oct 25, 2023Updated 2 years ago
- a DNA assembly library☆23Aug 13, 2025Updated 10 months ago
- Logs and progress bars manager for Python☆114May 9, 2025Updated last year
- Web application enabling users and software to browse, upload, and share synthetic biology designs☆83May 12, 2026Updated last month
- The MLST pipeline developed by the PathOGiST research group☆38Nov 29, 2023Updated 2 years ago
- ☆14Dec 10, 2018Updated 7 years ago
- Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.☆27Jan 10, 2022Updated 4 years ago