Python library to visualize circular plasmid maps
☆27Dec 12, 2021Updated 4 years ago
Alternatives and similar repositories for plasmidviewer
Users that are interested in plasmidviewer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources☆48May 12, 2026Updated 5 months ago
- sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.☆43May 27, 2024Updated 2 years ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 4 years ago
- ☆15Feb 6, 2023Updated 3 years ago
- A simple script to run an alignment with nucmer and visualise its results.☆10Apr 17, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Creating plasmid maps inside ggplot.☆95Sep 2, 2025Updated last year
- Pipeline detecting distant and putative novel insertion sequences in prokaryotic genomes☆13Jun 10, 2021Updated 5 years ago
- ☆11Sep 16, 2020Updated 6 years ago
- A Python project to read and write Snapgene *.dna into dict, json, and biopython object.☆48Sep 20, 2020Updated 6 years ago
- Webserver and command line tool for annotating engineered plasmids☆147Aug 24, 2026Updated 2 months ago
- a DNA assembly library☆23Aug 13, 2025Updated last year
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆23Mar 8, 2024Updated 2 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆38May 21, 2024Updated 2 years ago
- Hybrid Assembler for Plasmids☆10Jul 28, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ggplot2 extensions 入门☆24Aug 16, 2026Updated 2 months ago
- Targeted Detection and Reconstruction of Plasmids☆22May 7, 2024Updated 2 years ago
- Searching for Horizontal Gene Transfer☆10Feb 22, 2020Updated 6 years ago
- From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)☆21Jul 8, 2024Updated 2 years ago
- A healthy human gut genome collection☆26Aug 21, 2025Updated last year
- DNA overhang misannealing data for Python☆14May 15, 2025Updated last year
- detect temperate phage (active prophage) in assembled bacterial genome sequences☆15Feb 10, 2022Updated 4 years ago
- ISCompare, an opensource program to identify Differentially Located Insertion Sequences☆14Apr 30, 2026Updated 6 months ago
- Easy-to-use web application for visualization and comparison of genomes in Genbank file☆22May 27, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, …☆46Oct 22, 2026Updated last week
- ☆17May 1, 2025Updated last year
- StrainXpress is a de novo assembly method which base on overlap-layout-consensus (OLC) paradigm and can fast and accurately assemble high…☆13Mar 7, 2024Updated 2 years ago
- ⚡️🧬 FastMLST: A multi-core tool for multilocus sequence typing of draft genome assemblies☆26Jul 10, 2026Updated 3 months ago
- Prokaryotic Pangenome Analysis☆24Dec 3, 2021Updated 4 years ago
- useful functions for ggplot☆18Oct 9, 2026Updated 3 weeks ago
- A tooL for Prokaryotic Phylogeny And Clustering Analysis☆14Aug 5, 2026Updated 2 months ago
- Wrapper for short and long read mapping, creation of quality report(s) and estimation of genome size☆12Sep 30, 2025Updated last year
- Plot bacterial gene maps and genome comparison plots from command line with genoPlotR and GenomeDiagram☆13Mar 10, 2026Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Multi-target protein binder design for specificity and cross-reactivity.☆20Sep 10, 2026Updated last month
- Gene Absence Presence Identification tool.☆27Mar 28, 2025Updated last year
- A pipeline for whole genome assembly☆18Apr 21, 2022Updated 4 years ago
- Plasmid annotation pipeline☆17Oct 1, 2025Updated last year
- Burrows-Wheeler Aligner for x86,x86_64, arm and aarch64 architectures (PC, Raspberry PI, ODROID, M1)☆10Apr 13, 2022Updated 4 years ago
- Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method☆18Dec 29, 2022Updated 3 years ago
- plasmidVerify: plasmid contig verification tool☆15Apr 30, 2020Updated 6 years ago