ponnhide / plasmidviewerLinks
Python library to visualize circular plasmid maps
☆26Updated 3 years ago
Alternatives and similar repositories for plasmidviewer
Users that are interested in plasmidviewer are comparing it to the libraries listed below
Sorting:
- Nanopore Plasmid Sequencing☆33Updated last year
- Fast and flexible ORF finder☆73Updated 3 years ago
- Webserver and command line tool for annotating engineered plasmids☆125Updated last month
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆59Updated last year
- Find clustered hits from a BLAST search☆120Updated 8 months ago
- User-friendly software for viewing and processing Sanger DNA sequencing trace files.☆29Updated 7 years ago
- A simple command-line tool to download data from Joint Genome Institute databases☆52Updated 2 years ago
- ☆131Updated last year
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆23Updated 2 months ago
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆101Updated last year
- A Python module to analyze Sanger sequencing results.☆24Updated last year
- MGnify genome analysis pipeline☆107Updated 3 weeks ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆37Updated 2 months ago
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆147Updated 3 weeks ago
- Machine-learning-based general bacterial promoter prediction tool.☆51Updated 2 years ago
- Bioinformatics tool for Locus Visualisation☆113Updated 3 months ago
- Logan Unitigs and Contigs☆145Updated 3 weeks ago
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆53Updated 11 months ago
- Meta-Omics Software for Community Analysis☆35Updated 9 months ago
- Phage Annotation using Protein Structures☆123Updated this week
- Download files from NCBI Entrez by accession☆127Updated 11 months ago
- What should perfect bioinformatic tools be like?☆131Updated 3 months ago
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆51Updated 6 months ago
- A command line tool to identify and annotate small proteins in microbial sequencing datasets.☆24Updated 2 years ago
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆62Updated last week
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆86Updated 2 weeks ago
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome☆55Updated 5 months ago
- Python package to study microbial communities using metabolic modeling.☆106Updated last week
- ☆30Updated 8 months ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago