Python library to visualize circular plasmid maps
☆27Dec 12, 2021Updated 4 years ago
Alternatives and similar repositories for plasmidviewer
Users that are interested in plasmidviewer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources☆46Mar 22, 2026Updated 3 weeks ago
- sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.☆40May 27, 2024Updated last year
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 3 years ago
- ☆15Feb 6, 2023Updated 3 years ago
- Pipeline detecting distant and putative novel insertion sequences in prokaryotic genomes☆13Jun 10, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Creating plasmid maps inside ggplot.☆92Sep 2, 2025Updated 7 months ago
- ☆11Sep 16, 2020Updated 5 years ago
- A Python project to read and write Snapgene *.dna into dict, json, and biopython object.☆46Sep 20, 2020Updated 5 years ago
- ☆15May 1, 2025Updated 11 months ago
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆22Mar 8, 2024Updated 2 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆37May 21, 2024Updated last year
- An Open-Source web application to plan and document cloning and genome engineering☆50Mar 31, 2026Updated last week
- A healthy human gut genome collection☆25Aug 21, 2025Updated 7 months ago
- Hybrid Assembler for Plasmids☆10Jul 28, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)☆21Jul 8, 2024Updated last year
- ⚡️🧬 FastMLST: A multi-core tool for multilocus sequence typing of draft genome assemblies☆25Nov 19, 2025Updated 4 months ago
- DNA overhang misannealing data for Python☆13May 15, 2025Updated 10 months ago
- teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, …☆44Mar 26, 2026Updated 2 weeks ago
- Searching for Horizontal Gene Transfer☆10Feb 22, 2020Updated 6 years ago
- ISCompare, an opensource program to identify Differentially Located Insertion Sequences☆14Jul 30, 2024Updated last year
- VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupy…☆38Updated this week
- Wrapper for short and long read mapping, creation of quality report(s) and estimation of genome size☆12Sep 30, 2025Updated 6 months ago
- ggplot2 extensions 入门☆24Feb 8, 2026Updated 2 months ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Plot bacterial gene maps and genome comparison plots from command line with genoPlotR and GenomeDiagram☆13Mar 10, 2026Updated last month
- A tooL for Prokaryotic Phylogeny And Clustering Analysis☆13Jul 28, 2025Updated 8 months ago
- A platform for targeted annotation of (meta)genomic and (meta)transcriptomic datasets using HMM sets.☆14Apr 4, 2026Updated last week
- Pipelines for NGS data preprocessing by the Bock lab and friends☆22Aug 29, 2022Updated 3 years ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆27Mar 25, 2023Updated 3 years ago
- a JavaScript DNA, RNA, and protein sequence viewer☆312Updated this week
- Gene Absence Presence Identification tool.☆27Mar 28, 2025Updated last year
- Python interface to cd-hit☆10Feb 26, 2019Updated 7 years ago
- StrainXpress is a de novo assembly method which base on overlap-layout-consensus (OLC) paradigm and can fast and accurately assemble high…☆13Mar 7, 2024Updated 2 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- PANgenome with Annotations, COre identification, Tree and corresponding Alignments☆81Sep 20, 2023Updated 2 years ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆86Jan 24, 2026Updated 2 months ago
- A pipeline for whole genome assembly☆16Apr 21, 2022Updated 3 years ago
- some useful scripts for working with genomics and sequencing data☆17Oct 31, 2019Updated 6 years ago
- Plasmid and antimicrobial resistance pipeline☆16Dec 30, 2024Updated last year
- plasmidVerify: plasmid contig verification tool☆15Apr 30, 2020Updated 5 years ago
- Burrows-Wheeler Aligner for x86,x86_64, arm and aarch64 architectures (PC, Raspberry PI, ODROID, M1)☆10Apr 13, 2022Updated 4 years ago