Alternatives and similar repositories for protein-transfer

Users that are interested in protein-transfer are comparing it to the libraries listed below

• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆51Updated 3 weeks ago
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆38Updated 2 months ago
• microsoft / peft_proteomics
  LoRA for protein language models
  ☆41Updated last year
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆70Updated 2 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆70Updated 5 months ago
• Bitbol-Lab / ProtMamba-ssm
  ProtMamba: a homology-aware but alignment-free protein state space model
  ☆78Updated 2 months ago
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆69Updated last year
• Exscientia / abodybuilder3
  ☆66Updated 10 months ago
• Profluent-AI / proseLM-public
  Adapting protein language models for structure-conditioned design
  ☆40Updated last year
• zzhangzzhang / pLMs-interpretability
  ☆29Updated 10 months ago
• ronboger / conformal-protein-retrieval
  ☆16Updated this week
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆38Updated 11 months ago
• kirjner / GGS
  This repository implements Gibbs sampling with Graph-based Smoothing
  ☆39Updated last year
• Gonglab-THU / EvoAI
  ☆21Updated 8 months ago
• Profluent-Internships / MMDiff
  Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion
  ☆58Updated last year
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated 9 months ago
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆77Updated 6 months ago
• HySonLab / LatentDE
  LatentDE: Latent-based Directed Evolution for Protein Sequence Design
  ☆36Updated 4 months ago
• Immortals-33 / Scaffold-Lab
  A comprehensive benchmark on the performances of multiple protein backbone generative models.
  ☆64Updated 3 months ago
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆44Updated 4 months ago
• lehner-lab / domainome
  ☆15Updated 8 months ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 5 months ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆35Updated last year
• adaptyvbio / egfr_competition_1
  This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.
  ☆34Updated 8 months ago
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆40Updated 4 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• strodel-group / TransMEP
  Transfer learning for Mutation Effect Prediction
  ☆17Updated last year
• luo-group / ConFit
  Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape
  ☆31Updated last year
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆33Updated 8 months ago
• moritzgls / ESM-Effect
  ☆15Updated 6 months ago