wukevin / proteinclipLinks
Contrastive learning harmonizing protein language models and natural language models
☆32Updated last year
Alternatives and similar repositories for proteinclip
Users that are interested in proteinclip are comparing it to the libraries listed below
Sorting:
- Efficient implementatin of ESM family.☆58Updated 5 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆45Updated 2 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆78Updated last year
- ☆58Updated 8 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated 3 weeks ago
- ☆15Updated 5 months ago
- Adapting protein language models for structure-conditioned design☆39Updated 11 months ago
- Learning the language of protein-protein interactions☆79Updated last month
- ☆73Updated last month
- Metrics for our protein design competitions.☆33Updated 8 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆56Updated 3 weeks ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆58Updated 4 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆114Updated 4 months ago
- Aligning protein generative models with experimental fitness☆99Updated 2 months ago
- Inference code for Bio-Inspired Antibody Language Model☆25Updated 10 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 3 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆62Updated 5 months ago
- Deep Learning Library and Benchmark for Protein Sequence Learning (Bioinformatics 2025)☆30Updated 2 weeks ago
- Template-based protein design with Raygun☆70Updated last month
- Protein language model trained on coding DNA☆47Updated 8 months ago
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago
- Protein Design by Machine Learning guided Directed Evolution☆43Updated 3 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆57Updated 3 months ago
- RNA Multiple Sequence Alignment☆43Updated last year
- ☆17Updated 6 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆29Updated 10 months ago
- ☆38Updated 9 months ago
- ☆60Updated last year
- Directed evolution of proteins in sequence space with gradients☆86Updated 11 months ago
- Improved antibody structure-based design using inverse folding☆127Updated 2 months ago