deeprob / pssmproLinks
A python tool for numerically encoding protein sequences based on PSSM profile
☆13Updated 4 years ago
Alternatives and similar repositories for pssmpro
Users that are interested in pssmpro are comparing it to the libraries listed below
Sorting:
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆13Updated 3 months ago
- ☆23Updated 6 months ago
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Updated last year
- [Bioinformatics 2022] Cross-Modality and Self-Supervised Protein Embedding for Compound-Protein Affinity and Contact Prediction☆15Updated last year
- ☆12Updated last year
- Versatile human antibody sequence design☆16Updated last month
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆28Updated last year
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆20Updated 11 months ago
- Code for the paper "Learning to engineer protein flexibility".☆18Updated last week
- ☆9Updated 2 months ago
- ☆13Updated 2 months ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆11Updated last year
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆24Updated 2 years ago
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆12Updated last year
- Code for designing biased protein states☆14Updated 2 weeks ago
- ☆17Updated last year
- ☆15Updated last year
- ☆19Updated 9 months ago
- ☆15Updated last year
- Rank binders by structure modeling☆16Updated 4 months ago
- This repository contains a set of scripts for performing singular value decomposition on protein multiple sequence alignments, and analyz…☆11Updated 11 months ago
- ☆18Updated 2 months ago
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- ☆9Updated 2 years ago
- Computationally Restoring the Potency of a Clinical Antibody☆18Updated last year
- Extension of ThermoMPNN for double mutant predictions☆36Updated 2 weeks ago
- ☆38Updated 10 months ago
- Autoregressive fragment-based diffusion for target-aware ligand design☆29Updated last year
- ☆11Updated 10 months ago