deeprob / pssmproLinks
A python tool for numerically encoding protein sequences based on PSSM profile
☆13Updated 4 years ago
Alternatives and similar repositories for pssmpro
Users that are interested in pssmpro are comparing it to the libraries listed below
Sorting:
- [Bioinformatics 2022] Cross-Modality and Self-Supervised Protein Embedding for Compound-Protein Affinity and Contact Prediction☆17Updated last year
- ☆28Updated 5 months ago
- ☆12Updated 2 years ago
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆20Updated 6 months ago
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆24Updated 4 months ago
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Updated 2 years ago
- ☆10Updated 9 months ago
- Versatile human antibody sequence design☆21Updated 8 months ago
- ☆16Updated 4 months ago
- Code for the paper "Learning to engineer protein flexibility".☆22Updated 2 weeks ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆28Updated 3 years ago
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆20Updated last year
- p-IgGen: A Generative Paired Antibody Language Model☆13Updated 9 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Updated 2 years ago
- Protein representation and design under a single training scheme☆24Updated last month
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆13Updated last year
- This repository contains a set of scripts for performing singular value decomposition on protein multiple sequence alignments, and analyz…☆11Updated last year
- ☆15Updated last year
- ☆15Updated last year
- Clusters protein chains based on CA distance difference☆16Updated last year
- ☆11Updated 9 months ago
- ☆17Updated last year
- ☆20Updated last year
- dMaSIF implementation for google colab☆36Updated 2 years ago
- ☆26Updated 2 months ago
- [Nature Machine Intelligence] ImmunoStruct enables multimodal deep learning for immunogenicity prediction☆32Updated last week
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆23Updated last year
- ☆29Updated 2 months ago
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆13Updated last year
- Autoregressive fragment-based diffusion for target-aware ligand design☆32Updated last year