luo-group / ConFitLinks
Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape
☆31Updated last year
Alternatives and similar repositories for ConFit
Users that are interested in ConFit are comparing it to the libraries listed below
Sorting:
- Aligning protein generative models with experimental fitness☆103Updated 2 weeks ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆79Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆117Updated 5 months ago
- Efficient implementatin of ESM family.☆67Updated last week
- Official repository of EnzymeFlow☆93Updated 8 months ago
- ☆38Updated 11 months ago
- ☆68Updated 3 years ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆74Updated 2 weeks ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated 2 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆30Updated 3 weeks ago
- Structure-conditioned masked language modeling for protein sequence design☆69Updated last year
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆92Updated last week
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆52Updated 4 months ago
- ☆86Updated 3 weeks ago
- ☆42Updated 3 months ago
- ☆70Updated 5 months ago
- Fitness landscapes for antibodies☆80Updated last week
- ☆46Updated 7 months ago
- ☆29Updated 10 months ago
- ☆65Updated 10 months ago
- A generalized computational framework for biomolecular modeling.☆164Updated last week
- Code for humanization of antibody and nanobody☆49Updated 9 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆38Updated 2 months ago
- AlphaBind code + model accompanying pre-print☆71Updated last month
- Fast deep learning methods for large-scale protein-protein interaction screening☆51Updated 3 weeks ago
- Official Implementation of IgGM☆78Updated this week
- Tool for modelling the CDRs of antibodies☆32Updated 2 years ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆39Updated last year
- Gibbs sampling for generating protein sequences☆56Updated 7 months ago