Alternatives and similar repositories for data-repo_plm-finetune-eval

Users that are interested in data-repo_plm-finetune-eval are comparing it to the libraries listed below

• zhanghaicang / carbonmatrix_public
  ☆111Updated 2 weeks ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆40Updated 5 months ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆95Updated this week
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆55Updated 3 months ago
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆34Updated 5 months ago
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆59Updated 11 months ago
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆58Updated 3 months ago
• Kuhlman-Lab / evopro
  ☆80Updated 2 months ago
• A-Alpha-Bio / alphabind
  AlphaBind code + model accompanying pre-print
  ☆56Updated 4 months ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆113Updated 2 months ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆69Updated 4 months ago
• Profluent-AI / progen3
  Public Release of ProGen3 family of Models
  ☆61Updated 3 weeks ago
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆101Updated 2 months ago
• levinthal / Pallatom
  ☆92Updated 6 months ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆79Updated 9 months ago
• ai4protein / VenusREM
  🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)
  ☆68Updated this week
• sokrypton / RFdiffusion
  Code for running RFdiffusion
  ☆11Updated last month
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆59Updated last year
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆62Updated 3 years ago
• maranasgroup / CatPred
  Machine Learning models for in vitro enzyme kinetic parameter prediction
  ☆43Updated last month
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆55Updated 2 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆51Updated 5 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆57Updated 3 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆66Updated last month
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆71Updated last year
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆73Updated 3 weeks ago
• jkwang93 / AMP-Designer
  A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery
  ☆31Updated 3 weeks ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆54Updated last month