Alternatives and similar repositories for data-repo_plm-finetune-eval

Users that are interested in data-repo_plm-finetune-eval are comparing it to the libraries listed below

• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆68Updated 6 months ago
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆65Updated last year
• varun-shanker / structural-evolution
  ☆111Updated last year
• zhanghaicang / carbonmatrix_public
  ☆115Updated last month
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆116Updated 4 months ago
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆59Updated 6 months ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆82Updated last year
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆106Updated 4 months ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆74Updated 6 months ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆66Updated 3 years ago
• westlake-repl / SaprotHub
  Making Protein Modeling Accessible to All Biologists
  ☆114Updated last week
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆85Updated 3 weeks ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆78Updated last year
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• ai4protein / Pro-FSFP
  Pro-FSFP: Few-Shot Protein Fitness Prediction
  ☆92Updated 2 months ago
• ai4protein / ProSST
  🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)
  ☆130Updated 2 months ago
• A-Alpha-Bio / alphabind
  AlphaBind code + model accompanying pre-print
  ☆67Updated last week
• LBM-EPFL / PeSTo
  Geometric deep learning method to predict protein binding interfaces from a protein structure.
  ☆139Updated last year
• Kuhlman-Lab / evopro
  ☆85Updated last week
• chandar-lab / AMPLIFY
  ☆104Updated 2 weeks ago
• levinthal / Pallatom
  ☆105Updated 2 months ago
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago
• westlake-repl / Denovo-Pinal
  Text-guided protein design
  ☆80Updated 4 months ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆102Updated 2 months ago
• zchwang / CataPro
  A generalized enzyme kinetics parameter prediction model.
  ☆55Updated last month
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆59Updated last year
• ikalvet / heme_binder_diffusion
  ☆134Updated 3 weeks ago
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆154Updated last year
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆63Updated 8 months ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆109Updated 6 months ago