Spacewalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js and juicebox.js instances for rapid and intuitive visual comparison and interaction between 3D data and 1D genomic data.
☆12Nov 8, 2025Updated 10 months ago
Alternatives and similar repositories for spacewalk
Users that are interested in spacewalk are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multiple Genome Viewer☆12Sep 14, 2026Updated last week
- A simple example of parsing BAM files using htslib☆12Mar 22, 2016Updated 10 years ago
- Read CRAM v3 and v2 in node or in the browser☆18Updated this week
- detecting spatial patterns of allele-specific expression☆11May 22, 2024Updated 2 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A mosaic genome painting tool for plant genomes☆18May 6, 2026Updated 4 months ago
- A high-throughput analysis framework for Y-chromosomal next-generation sequencing data☆17Jun 11, 2021Updated 5 years ago
- Learn morphological states of dynamic cells☆13Apr 16, 2023Updated 3 years ago
- A web-based interactive 3D molecular viewer with Augmented Reality & Holographic Display.☆12May 9, 2019Updated 7 years ago
- ☆13Jun 27, 2024Updated 2 years ago
- Morandi color palette for R plot☆11Nov 20, 2020Updated 5 years ago
- ☆10Updated this week
- Selective and Recursive local Assembler☆15Jan 31, 2022Updated 4 years ago
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A python wrapper around SURVIVOR☆20Feb 15, 2024Updated 2 years ago
- A collection of algorithms done in JavaScript with visual demos☆11Apr 17, 2023Updated 3 years ago
- Cooler demo using a Jupyter notebook Binder☆20Sep 24, 2020Updated 5 years ago
- The Genome U-Plot is a JavaScript tool to visualize chromosomal abnormalities in the Human Genome using a U-shape layout.☆32Dec 10, 2022Updated 3 years ago
- Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing libra…☆15Feb 27, 2024Updated 2 years ago
- Gene expression viewer template☆12Aug 30, 2017Updated 9 years ago
- Variant quality checking scripts.☆12Feb 4, 2016Updated 10 years ago
- ☆12May 26, 2020Updated 6 years ago
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆11Jul 22, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- python-nexus - Generic nexus (.nex, .trees) reader/writer for python☆12Feb 20, 2025Updated last year
- This methodology is based of QRSPI workflow. (Question -> Research -> Spec/Design -> Plan -> Implement)☆25Mar 12, 2026Updated 6 months ago
- Python client for the OmniPath web service☆62Feb 19, 2026Updated 7 months ago
- High quality in silico spectral library generation for data-independent acquisition proteomics☆23Updated this week
- Materials for GCB535 at Penn.☆21Apr 19, 2019Updated 7 years ago
- A collection of htmlwidgets handy for epidemiology, etc.☆13Jul 5, 2015Updated 11 years ago
- GitHub pages for GPML-Repo☆12Updated this week
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 5 months ago
- Code repository for the T2T-Y paper☆25Jul 11, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 11 months ago
- ☆12May 13, 2025Updated last year
- a repo to generate mcps for render☆18Jun 20, 2025Updated last year
- [NeurIPS 2023] A tiny and header-only C++ library aiming to be the fastest linear SVM solver.☆39Dec 1, 2024Updated last year
- A scalable framework for automatically indexing microbial genomes and accurately characterizing metagenome-assembled genomes with Sequenc…☆24Aug 13, 2026Updated last month
- Taiga for Dataset management☆12May 5, 2026Updated 4 months ago
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago