Edinburgh-Genome-Foundry / CAB

Related projects: ⓘ

• Edinburgh-Genome-Foundry / CUBA
  🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software
  ☆19Updated last year
• Edinburgh-Genome-Foundry / genome_collector
  Easily download genomes and build BLAST/Bowtie indexes in Python
  ☆21Updated last year
• Edinburgh-Genome-Foundry / BandWagon
  🎺 Plot DNA digestion band patterns with Python
  ☆19Updated 2 years ago
• Edinburgh-Genome-Foundry / Caravagene
  🎨 Python library to plot multi-part genetic constructs
  ☆25Updated last year
• Edinburgh-Genome-Foundry / BandWitch
  💫 Computer-aided DNA assembly validation and identification from restriction digests.
  ☆15Updated 2 years ago
• Edinburgh-Genome-Foundry / Primavera
  Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.
  ☆33Updated 2 years ago
• Edinburgh-Genome-Foundry / sequenticon
  Generate identicons for DNA sequences with Python
  ☆37Updated 2 years ago
• Edinburgh-Genome-Foundry / SBOL-Visual-CSS
  Draw genetic elements with HTML & CSS
  ☆15Updated 7 years ago
• IQTLabs / freqgen
  🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies
  ☆16Updated last year
• koonimaru / DeepGMAP
  Deep learning-based prediction of regulatory genome sequences
  ☆11Updated 4 years ago
• Edinburgh-Genome-Foundry / DnaWeaver
  A route planner for DNA assembly
  ☆29Updated 11 months ago
• jvrana / Terrarium
  Computer-Aided Process Planner (CAPP) for Synthetic Biology Research
  ☆11Updated 3 years ago
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆38Updated 2 years ago
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆49Updated 3 months ago
• fomightez / sequencework
  programs and scripts, mainly python, for analyses related to nucleic or protein sequences
  ☆24Updated 3 weeks ago
• IQTLabs / squiggle
  📈 DNA Sequence Visualization for Humans
  ☆40Updated 3 years ago
• dmnfarrell / pybioviz
  bioinformatics visualization tools with pyviz/bokeh
  ☆18Updated 11 months ago
• Edinburgh-Genome-Foundry / GoldenHinges
  Short overhangs design for DNA assembly
  ☆11Updated 2 years ago
• phiweger / nanotext
  Proteins as words, genomes as documents.
  ☆20Updated 3 years ago
• biolab / orange3-bioinformatics
  🍊🔬 Bioinformatics add-on for Orange3
  ☆20Updated 3 months ago
• harmslab / epistasis
  A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.
  ☆33Updated last year
• AAnzel / MOVIS
  MOVIS: A Multi-Omics Software Solution for Multi-modal Time-Series Clustering, Embedding, and Visualizing Tasks, by Aleksandar Anžel, Dom…
  ☆9Updated 2 years ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆50Updated 2 weeks ago
• Edinburgh-Genome-Foundry / crazydoc
  Read DNA sequences from colourful Microsoft Word documents
  ☆32Updated last year
• jvrana / benchling-api
  A python wrapper for the benchling api
  ☆50Updated 4 years ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated last month
• xguse / cookiecutter-snakemake-analysis-pipeline
  A cookiecutter template that reflects my favored structure for setting up Snakemake-based analysis pipelines.
  ☆16Updated 8 years ago
• pirl-unc / mhcgnomes
  Parsing MHC nomenclature in the wild
  ☆16Updated 5 months ago
• benchling / integration-examples
  Example usage of the Benchling API: https://docs.benchling.com/
  ☆29Updated 6 months ago
• dmnfarrell / pathogenie
  Desktop tool for microbial genome annotation and gene detection
  ☆12Updated 3 years ago