Genomic plot in trellis layout
☆44Jan 30, 2026Updated 9 months ago
Alternatives and similar repositories for gtrellis
Users that are interested in gtrellis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Collection of R functions used in the Hochwagen Lab☆12Aug 4, 2025Updated last year
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆202Jan 30, 2026Updated 9 months ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆17Nov 20, 2018Updated 7 years ago
- Two methods for mapping and visualizing associated data on phylogeny using ggtree☆12Dec 25, 2018Updated 7 years ago
- Comprehensive genome-wide visualization of absolute copy number and copy neutral variations☆30Apr 10, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆17Jan 3, 2019Updated 7 years ago
- R htmlwidget package for ideogram.js☆15Oct 26, 2022Updated 4 years ago
- R package for InterMine☆18Apr 5, 2022Updated 4 years ago
- Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency☆155May 31, 2026Updated 5 months ago
- Visualize genomic data by Hilbert curve☆44Apr 23, 2026Updated 6 months ago
- Plotting average TAD heatmap for Hi-C data (give TAD segmentation and cool/hiclib interactions map).☆10Jun 5, 2021Updated 5 years ago
- Calculate GC% and GC deviation for circular genomes☆17Oct 15, 2025Updated last year
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆25Aug 17, 2016Updated 10 years ago
- Calculate circos format data of GC content and GC skew from genome data.☆12Sep 20, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆17Jul 7, 2023Updated 3 years ago
- ATAC-seq snakemake pipeline☆90Feb 13, 2020Updated 6 years ago
- Read HOMER motif analysis output in R.☆18Mar 1, 2018Updated 8 years ago
- Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data☆24Sep 28, 2022Updated 4 years ago
- A tool for bigWig files.☆119May 23, 2018Updated 8 years ago
- computational tool to identify trasposable element insertions using Hi-C data☆10Sep 17, 2020Updated 6 years ago
- TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.☆49Nov 16, 2022Updated 3 years ago
- Define regions in the genome☆34Mar 3, 2022Updated 4 years ago
- Copy number estimation of highly duplicated sequences☆12Aug 15, 2017Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Multiple Genome Viewer☆12Sep 14, 2026Updated last month
- A tool for evaluating RNA seq mapping☆22Jul 12, 2019Updated 7 years ago
- Profile and Heatmap Visualization by Using ggplot2 and grid☆12Nov 21, 2023Updated 2 years ago
- ☆13Sep 22, 2017Updated 9 years ago
- PHi-C: deciphering Hi-C data into polymer dynamics☆13Aug 12, 2020Updated 6 years ago
- Hi-C data analysis tool☆13May 31, 2017Updated 9 years ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆67May 9, 2025Updated last year
- Multiple sequence alignment browser☆12Dec 12, 2022Updated 3 years ago
- ☆11Nov 21, 2017Updated 8 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- QC report generator for Hi-C pairs file☆13Sep 14, 2020Updated 6 years ago
- MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data☆24Apr 24, 2017Updated 9 years ago
- An analysis pipeline for Nanopore direct-RNA sequencing☆15Jul 24, 2025Updated last year
- Analysis and Visualization of Ribosome Profiling Data☆12Dec 14, 2019Updated 6 years ago
- Reproduce analyses in Harmony Manuscript☆11Feb 21, 2020Updated 6 years ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Dec 7, 2017Updated 8 years ago
- Alleloscope is a method for allele-specific copy number estimation that can be applied to single cell DNA and ATAC sequencing data (separ…☆33Mar 10, 2023Updated 3 years ago