VALIS-software / valis-hpgv
High performance WebGL genome visualization
☆15Updated 3 years ago
Alternatives and similar repositories for valis-hpgv:
Users that are interested in valis-hpgv are comparing it to the libraries listed below
- Python NGS Repository☆9Updated 7 months ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 2 years ago
- ☆10Updated this week
- bedtools-like functionality for interval sets in rust☆49Updated 7 months ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆44Updated last year
- High-throughput gene to knowledge mapping through massive integration of public sequencing data.☆31Updated 6 years ago
- Keep Me Around: Intron Retention Detection☆29Updated 6 years ago
- Software to assemble contigs/scaffolds into chromosomes using Hi-C data☆28Updated 5 months ago
- A high-performance BigWig and BigBed library in Rust☆78Updated 2 weeks ago
- a minimal, scriptable genome browser for python☆50Updated 3 months ago
- Fast sequencing data quality metrics☆25Updated this week
- Genome Contact Map Explorer - gcMapExplorer. Visit:☆21Updated 3 years ago
- HiGlass track for displaying arcs between disconnected regions☆9Updated 2 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆38Updated last year
- Builds a PEP from SRA or GEO accessions☆48Updated 6 months ago
- for visual evaluation of read support for structural variation☆52Updated 9 months ago
- WebGL-based viewer for spatially-resolved transcriptomics data☆26Updated 2 years ago
- Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.☆39Updated last month
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆42Updated 2 months ago
- Genomic coordinates of problematic genomic regions as GRanges☆35Updated 3 months ago
- simple library for dealing with SAM cigar strings☆40Updated 4 years ago
- Annotation and segmentation of MAS-seq data☆20Updated last year
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated last year
- Read specialized NGS formats as data frames in R, Python, and more.☆69Updated this week
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- A program for the analysis of single cell nanopore long read data☆16Updated this week
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 2 years ago
- Fast FASTQ sample demultiplexing in Rust.☆61Updated this week
- A tool for projecting genomic alignments to transcriptomic coordinates☆35Updated 9 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆35Updated 8 months ago