mathii / europe_selection

Related projects ⓘ

Alternatives and complementary repositories for europe_selection

• martinsikora / admixr
  an R package for admixture analyses
  ☆16Updated 9 years ago
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆13Updated 4 years ago
• StoreyLab / popkin
  R package to estimate kinship and FST from SNP data
  ☆19Updated last month
• popsim-consortium / analysis
  Analysis of inference methods on standard population models
  ☆24Updated 2 years ago
• stephenslab / effective-computing
  Effective Computing—Resources for Computational Biologists
  ☆24Updated 4 years ago
• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆28Updated 6 years ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆17Updated 6 years ago
• alexkychen / assignPOP
  Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…
  ☆17Updated 7 months ago
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆27Updated 10 months ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated last year
• marcomilanesi / BITE
  BITE: BioInformatics tools for everyone
  ☆19Updated 3 months ago
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆39Updated last month
• StoreyLab / bnpsd
  R package to model and simulate admixed populations
  ☆8Updated last year
• hemstrow / snpR
  ☆28Updated this week
• EricArcher / strataG
  strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
  ☆25Updated 5 months ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆35Updated 10 months ago
• bodkan / admixr
  An R package for reproducible and automated ADMIXTOOLS analyses
  ☆28Updated 5 months ago
• laurabenestan / RDA_outlier
  Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…
  ☆8Updated 4 years ago
• ANGSD / NgsRelate
  ☆42Updated 10 months ago
• trayc7 / DPPDiv
  DPPDIV
  ☆12Updated 4 years ago
• YTLogos / ttplot
  Tao Yan's Plot Toolkit
  ☆11Updated 5 years ago
• MerrimanLab / selectionTools
  Pipeline to take VCF through to Selection Analysis.
  ☆58Updated last year
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆35Updated 10 months ago
• CMPG / signet
  An R package to detect selection in biological pathways
  ☆14Updated 9 months ago
• rystanley / genepopedit
  Simple and flexible manipulation of genomic data.
  ☆15Updated 4 months ago
• kjgilbert / QstFstComp
  R Package for performing Qst-Fst analyses
  ☆21Updated 6 years ago
• millanek / fineRADstructure
  A package for population structure inference from RAD-seq data
  ☆31Updated 3 years ago
• jjberg2 / PolygenicAdaptationCode
  ☆20Updated 4 years ago
• liamrevell / learnPopGen
  initial commit
  ☆25Updated last year
• NovembreLab / eems-around-the-world
  Repo to analyze population genetic data with many different methods
  ☆15Updated 5 years ago