kholsinger / Lecture-Notes-in-Population-Genetics
LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut
☆34Updated last year
Alternatives and similar repositories for Lecture-Notes-in-Population-Genetics:
Users that are interested in Lecture-Notes-in-Population-Genetics are comparing it to the libraries listed below
- A set of functions to visualise genotypes based on a VCF☆85Updated 3 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆41Updated 5 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Pinpoints the mutation favored by selection☆33Updated 3 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆92Updated 8 years ago
- Detecting natural selection from population-based genetic data☆27Updated 5 years ago
- ☆21Updated 5 years ago
- Software for estimating genome-wide genealogies for thousands of samples☆29Updated 3 months ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆43Updated 5 months ago
- kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.☆31Updated 9 months ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated 9 months ago
- Rank-based Gene Ontology analysis of gene expression data☆40Updated 2 years ago
- ☆43Updated last year
- Repository for speciation genomics website☆24Updated 6 months ago
- ☆20Updated 4 years ago
- simple examples of using supervised machine learning for population genetics inference☆38Updated 7 years ago
- feature-based deep learning for the identification of selective sweeps☆51Updated this week
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆71Updated 3 years ago
- Methods for examining PCA locally along the genome.☆74Updated 5 months ago
- GBSX: a toolkit for experimental design and demultiplexing genotyping by sequencing experiments☆18Updated 8 years ago
- web documentation for Trinotate☆48Updated 2 years ago
- A pipeline that accepts a VCF file to run through Admixture☆57Updated 3 weeks ago
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 3 years ago
- Genome Annotation Without Nightmares☆43Updated last week
- Population genetics analyses from NGS data☆25Updated 3 years ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆26Updated 6 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆55Updated 2 months ago
- Infer demographic history with the Moran model☆47Updated 10 months ago
- Tutorial about R package PopGenome☆41Updated 5 years ago
- Recombination Landscape Estimation using Recurrent Neural Networks☆53Updated this week