kholsinger / Lecture-Notes-in-Population-GeneticsLinks
LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut
☆35Updated last year
Alternatives and similar repositories for Lecture-Notes-in-Population-Genetics
Users that are interested in Lecture-Notes-in-Population-Genetics are comparing it to the libraries listed below
Sorting:
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Methods for examining PCA locally along the genome.☆83Updated last year
- Pinpoints the mutation favored by selection☆34Updated 3 years ago
- A set of functions to visualise genotypes based on a VCF☆87Updated 3 years ago
- Rank-based Gene Ontology analysis of gene expression data☆42Updated 2 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 9 years ago
- A set of workflows written in Nextflow for Genome Annotation.☆45Updated last year
- kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.☆39Updated last year
- Estimate recombination rates from population genetic data☆68Updated 5 years ago
- A pipeline that accepts a VCF file to run through Admixture☆62Updated 8 months ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆62Updated 10 months ago
- Tutorial on using popular tools for learning about population history☆51Updated 7 years ago
- Genome Annotation Without Nightmares☆46Updated 7 months ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆73Updated 4 years ago
- findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a ske…☆38Updated last year
- Evolutionary Transcriptomics with R☆45Updated 3 weeks ago
- Building SuperTranscripts: A linear representation of transcriptome data☆67Updated 4 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 3 years ago
- Repository for speciation genomics website☆26Updated 2 weeks ago
- a bash pipeline for RAD sequencing☆55Updated 7 months ago
- A program for the Maximum-likelihood analysis of population genomic data.☆29Updated 4 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆64Updated 2 months ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- ☆44Updated 6 months ago
- A collection of scripts for processing fastq files in ways to improve de novo transcriptome assemblies, and for evaluating those assembli…☆50Updated last year
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated last month
- Transposable element polymorphism identification☆34Updated 5 years ago