Alternatives and similar repositories for admixr

Users that are interested in admixr are comparing it to the libraries listed below

• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆28Updated 7 years ago
• marcomilanesi / BITE
  BITE: BioInformatics tools for everyone
  ☆21Updated last year
• hemstrow / snpR
  ☆30Updated this week
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆42Updated last month
• bodkan / admixr
  An R package for reproducible and automated ADMIXTOOLS analyses
  ☆33Updated 6 months ago
• popgenmethods / ldpop
  Two locus likelihoods and ARGs under changing population size
  ☆14Updated 4 months ago
• ANGSD / NgsRelate
  ☆43Updated 5 months ago
• danjlawson / badMIXTURE
  R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes
  ☆25Updated 5 years ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated 2 years ago
• timbeissinger / Maize-Teo-Scripts
  ☆17Updated 9 years ago
• mcstitzer / maize_genomic_ecosystem
  ☆11Updated 3 years ago
• LynchLab / MAPGD
  A program for the Maximum-likelihood analysis of population genomic data.
  ☆29Updated 4 years ago
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆38Updated last year
• regevs / gamma_smc
  ☆20Updated last year
• ksiewert / BetaScan
  Genome-wide scan for balancing selection using beta statistic
  ☆29Updated 2 years ago
• GonzalezLab / T-lex3
  ☆15Updated 5 years ago
• thierrygosselin / assigner
  Population assignment analysis using R
  ☆17Updated last month
• TCLamnidis / AdmixturePlotter
  An R script to generate plots for ADMIXTURE runs, for multiple K values.
  ☆19Updated 6 months ago
• nicocriscuolo / StructuRly
  Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis
  ☆21Updated 9 months ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆36Updated last year
• mfumagalli / Copenhagen
  Analysis of genotyping and next-generation sequencing data in medical and population genetics
  ☆23Updated 3 years ago
• champost / ABLE
  ABLE - Approximate Blockwise Likelihood Estimation
  ☆17Updated 7 years ago
• tplinderoth / ngsParalog
  Copy number variation detection using NGS data.
  ☆15Updated last year
• emmanuelparadis / psmcr
  R Port of psmc
  ☆15Updated 2 years ago
• popsim-consortium / analysis
  Analysis of inference methods on standard population models
  ☆25Updated 3 years ago
• devillemereuil / bayescenv
  BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.
  ☆18Updated 8 years ago
• YTLogos / ttplot
  Tao Yan's Plot Toolkit
  ☆12Updated 6 years ago
• fgvieira / ngsF-HMM
  Estimation of per-individual inbreeding tracts under a probabilistic framework
  ☆13Updated 2 years ago
• pblischak / polyploid-genotyping
  SNP genotyping in polyploids
  ☆17Updated 5 years ago
• owensgl / haploblocks
  Scripts and resources for the haploblocks manuscript
  ☆16Updated 5 years ago