martinsikora / admixrView external linksLinks
an R package for admixture analyses
☆18May 15, 2015Updated 10 years ago
Alternatives and similar repositories for admixr
Users that are interested in admixr are comparing it to the libraries listed below
Sorting:
- Analysis scripts from the paper "Eight thousand years of natural selection in Europe".☆11Nov 19, 2015Updated 10 years ago
- R Port of psmc☆17Mar 16, 2023Updated 2 years ago
- Repo to analyze population genetic data with many different methods☆15Oct 23, 2019Updated 6 years ago
- Module for analysing admixture graphs☆29Apr 30, 2018Updated 7 years ago
- Various bioinformatics tools☆20Oct 29, 2024Updated last year
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Feb 27, 2025Updated 11 months ago
- Package to design primers for MutaSeq and related methods☆11Jan 15, 2021Updated 5 years ago
- polysat 1.7: tools for polyploid microsatellite analysis☆12Dec 20, 2024Updated last year
- detectRuns: a R Package for Runs of Homozygosity and Runs of Heterozygosity☆12May 25, 2023Updated 2 years ago
- ☆21Dec 15, 2023Updated 2 years ago
- ☆18Oct 3, 2025Updated 4 months ago
- Population genetic summary statistics☆40Sep 28, 2023Updated 2 years ago
- A couple of tools I find indispensable for post orthomcl down-stream analysis.☆11Oct 2, 2019Updated 6 years ago
- ☆12Apr 10, 2021Updated 4 years ago
- ☆11Jun 26, 2020Updated 5 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Aug 25, 2022Updated 3 years ago
- An innovative GWAS procedure for studies on germplasm population and plant breeding☆14Nov 16, 2020Updated 5 years ago
- ☆17Nov 19, 2021Updated 4 years ago
- Multiplex Primer Design☆12May 3, 2020Updated 5 years ago
- ☆12Nov 23, 2020Updated 5 years ago
- Joint inference of heterozygosity rates and runs of homozygosity☆18Dec 12, 2025Updated 2 months ago
- scripts to parse and analyse MCScanX collinearity output☆32Mar 3, 2020Updated 5 years ago
- BITE: BioInformatics tools for everyone☆21Jul 25, 2024Updated last year
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Nov 11, 2019Updated 6 years ago
- Benchmarking variant calling in polyploids☆15Nov 26, 2021Updated 4 years ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Sep 12, 2025Updated 5 months ago
- Estimation of per-individual inbreeding tracts under a probabilistic framework☆15Aug 11, 2023Updated 2 years ago
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Apr 29, 2021Updated 4 years ago
- Next Index to Query Kmer Intersection☆17Feb 1, 2023Updated 3 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Nov 21, 2019Updated 6 years ago
- This is a read-only mirror of the CRAN R package repository. PopGenome — An Efficient Swiss Army Knife for Population Genomic Analyses …☆16Feb 3, 2020Updated 6 years ago
- This is *NOT* the official repository of samtools.☆49Jun 9, 2017Updated 8 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Jun 6, 2019Updated 6 years ago
- AccuSyn: An Accurate Web-based Genome Synteny Browser☆17Aug 27, 2024Updated last year
- B73Ab10 genome assembly methods☆16Jan 21, 2022Updated 4 years ago
- Characterization of Structural Variation in Chinese samples☆18Dec 22, 2021Updated 4 years ago
- Scripts for NGS processing☆17Sep 6, 2017Updated 8 years ago
- tips and tricks in genome-wide association studies - a tutorial☆14Jul 25, 2023Updated 2 years ago
- ☆16Apr 9, 2021Updated 4 years ago