Alternatives and similar repositories for admixr

Users that are interested in admixr are comparing it to the libraries listed below

• marcomilanesi / BITE
  BITE: BioInformatics tools for everyone
  ☆21Updated 11 months ago
• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆28Updated 7 years ago
• mcstitzer / maize_genomic_ecosystem
  ☆11Updated 3 years ago
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆41Updated 9 months ago
• hemstrow / snpR
  ☆30Updated last month
• ANGSD / NgsRelate
  ☆43Updated 3 months ago
• thierrygosselin / assigner
  Population assignment analysis using R
  ☆17Updated last week
• danjlawson / badMIXTURE
  R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes
  ☆25Updated 5 years ago
• bodkan / admixr
  An R package for reproducible and automated ADMIXTOOLS analyses
  ☆33Updated 4 months ago
• jdaron / CLARI-TE
  ☆11Updated 10 years ago
• regevs / gamma_smc
  ☆20Updated last year
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆38Updated last year
• ksiewert / BetaScan
  Genome-wide scan for balancing selection using beta statistic
  ☆29Updated 2 years ago
• mfumagalli / Copenhagen
  Analysis of genotyping and next-generation sequencing data in medical and population genetics
  ☆23Updated 2 years ago
• nicocriscuolo / StructuRly
  Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis
  ☆22Updated 7 months ago
• trayc7 / DPPDiv
  DPPDIV
  ☆12Updated 5 years ago
• GonzalezLab / T-lex3
  ☆15Updated 5 years ago
• devillemereuil / bayescenv
  BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.
  ☆19Updated 7 years ago
• YTLogos / ttplot
  Tao Yan's Plot Toolkit
  ☆12Updated 5 years ago
• AppliedBioinformatics / Brassica_oleracea_rapa_napus_code
  Code for the Brassica oleracea/rapa/napus genomic comparison
  ☆16Updated 4 years ago
• timbeissinger / Maize-Teo-Scripts
  ☆17Updated 9 years ago
• emmanuelparadis / psmcr
  R Port of psmc
  ☆15Updated 2 years ago
• MartinPippel / DAmar
  Long read QC, assembly and scaffolding pipeline
  ☆13Updated 5 years ago
• IsmailM / Introgression-Tutorial
  A tutorial on genomic tests for introgression
  ☆9Updated 9 years ago
• evolgenomics / haplotagging
  Code and binaries related to processing haplotagging data
  ☆15Updated 3 years ago
• mscampbell / Genome_annotation
  These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…
  ☆16Updated 7 years ago
• LynchLab / MAPGD
  A program for the Maximum-likelihood analysis of population genomic data.
  ☆28Updated 4 years ago
• luntergroup / smcsmc
  Demographic inference from whole genomes
  ☆13Updated 2 years ago
• weigelworld / pan-nlrome
  The GitHub repository for the A. thaliana pan-NLR'ome project.
  ☆17Updated 6 years ago
• GenisGE / evalAdmix
  ☆13Updated last year