Handy genetics-related R scripts
☆32Nov 22, 2019Updated 6 years ago
Alternatives and similar repositories for evachan.org-Rscripts
Users that are interested in evachan.org-Rscripts are comparing it to the libraries listed below
Sorting:
- Scripts to calculate population genetics statistics☆55Jul 20, 2018Updated 7 years ago
- Population genetics analyses☆23Oct 10, 2019Updated 6 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Aug 25, 2022Updated 3 years ago
- Repo to analyze population genetic data with many different methods☆15Oct 23, 2019Updated 6 years ago
- ☆17Dec 2, 2015Updated 10 years ago
- Short scripts for converting genetic data between formats.☆30Nov 11, 2022Updated 3 years ago
- tips and tricks in genome-wide association studies - a tutorial☆14Jul 25, 2023Updated 2 years ago
- Read PLINK BED/BIM/FAM files into R☆45Jul 26, 2021Updated 4 years ago
- Pipeline in place at the UGI for DNA level analysis☆11Aug 29, 2016Updated 9 years ago
- Learning to Program via Python, and Scientific Python for Programmers course material☆13Jan 23, 2025Updated last year
- Repository for code used for publications☆30Oct 20, 2025Updated 4 months ago
- Direct RNA publication scripts☆11Sep 20, 2017Updated 8 years ago
- Standard operating procedures for H3ABionet data processing and analyses☆11Aug 30, 2021Updated 4 years ago
- CDSeq MATLAB code. CDSeq is a novel computational complete deconvolution method for dissecting tissue heterogeneity.☆11Oct 10, 2020Updated 5 years ago
- This is the script used for analysis the population data of alfalfa☆11May 22, 2024Updated last year
- Tree Health and Plant Biosecurity Initiative - Phytophthora ITS1 Classifier Tool☆10Feb 2, 2026Updated 3 weeks ago
- Sweep Inference Framework (controlling for correlation)☆28Jul 10, 2024Updated last year
- Vignettes for Population Genetics in R☆26Aug 11, 2020Updated 5 years ago
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆12Aug 31, 2018Updated 7 years ago
- Building a Chinese pan-genome of 486 individuals☆12Nov 23, 2022Updated 3 years ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆28Aug 21, 2018Updated 7 years ago
- The Simple Fool's Guide to population genomics using RNA-Seq☆28Jul 8, 2016Updated 9 years ago
- ☆30Aug 16, 2021Updated 4 years ago
- ☆12Jun 16, 2023Updated 2 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆16Mar 26, 2022Updated 3 years ago
- A primer for computational tools to analyze genetics of populations in R☆91Feb 11, 2021Updated 5 years ago
- analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)☆12Jun 16, 2016Updated 9 years ago
- Two locus likelihoods and ARGs under changing population size☆14Dec 18, 2025Updated 2 months ago
- scripts and intermediate files used to annotate TEs in Jiao et al.☆34Apr 12, 2018Updated 7 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 8 years ago
- ☆17Nov 26, 2023Updated 2 years ago
- Scripts for population genetics analysis☆20Nov 10, 2022Updated 3 years ago
- A Suite of Packages for Analysis of Big Genomic Data☆34Jan 20, 2025Updated last year
- An R package to help in plotting PCA results nicely.☆12Jan 16, 2020Updated 6 years ago
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Nov 24, 2020Updated 5 years ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆19Apr 23, 2025Updated 10 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Jun 28, 2021Updated 4 years ago
- The Soft/Hard Inference through Classification tool for detecting hard and soft selective sweeps☆14Feb 2, 2021Updated 5 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15May 22, 2019Updated 6 years ago