Shiny apps for teaching Population Genetics
☆66Feb 4, 2023Updated 3 years ago
Alternatives and similar repositories for shiny_popgen
Users that are interested in shiny_popgen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts to generate simulations and plots used in blog posts on genetic and genealogical ancestry gcbias.org/category/genetic-genealogy/ …☆17Dec 2, 2013Updated 12 years ago
- Population genetics notes☆706Jun 1, 2023Updated 3 years ago
- A framework for simulation-based inference in evolutionary biology☆28Jan 13, 2026Updated 9 months ago
- simple examples of using supervised machine learning for population genetics inference☆40Oct 26, 2017Updated 8 years ago
- LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut☆37Dec 4, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Work for the tree sequence inference paper.☆24Oct 19, 2020Updated 5 years ago
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Aug 25, 2022Updated 4 years ago
- Population genetic simulations in R☆64Updated this week
- Demographic analysis of Brassica oleracea☆10May 19, 2026Updated 4 months ago
- population genetic simulations with R and Shiny☆30Nov 3, 2024Updated last year
- deep learning prediction of geographic location from individual genome sequences☆54Jan 20, 2025Updated last year
- A primer for computational tools to analyze genetics of populations in R☆92Sep 11, 2026Updated last month
- ☆17Dec 2, 2015Updated 10 years ago
- parallelLastz: Running Lastz in parallel☆18Sep 13, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Polygenic Adaptation Likelihood Method - Inferring natural selection on complex traits from whole-genome genealogies☆16Nov 13, 2020Updated 5 years ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆43Nov 15, 2023Updated 2 years ago
- CLfinder-OrthNet, a pipeline to encode orthologs from multiple genomes and their evolutionary history into networks (OrthNets) based on c…☆10Jun 9, 2022Updated 4 years ago
- ☆57Feb 14, 2022Updated 4 years ago
- Module for analysing admixture graphs☆30Apr 30, 2018Updated 8 years ago
- Process MS results in R, in a tidy way☆16May 25, 2018Updated 8 years ago
- This repository contains curricular material, lecture notes, labs, assignments, exams, code, solutions from the Spring 2022 version of BI…☆16May 24, 2022Updated 4 years ago
- defiNETti is a program for performing Bayesian inference on exchangeable (or permutation-invariant) data via deep learning. In particula…☆20Apr 10, 2018Updated 8 years ago
- a short graduate population biology course☆13Feb 22, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆13May 16, 2016Updated 10 years ago
- Distribution maps and niche models for venomous snakes.☆11Mar 22, 2026Updated 6 months ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆23Jul 29, 2026Updated 2 months ago
- mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.☆90Jun 14, 2021Updated 5 years ago
- Scripts to calculate population genetics statistics☆55Jul 20, 2018Updated 8 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆46Sep 8, 2026Updated last month
- Lecture Notes on Computational and Mathematical Population Genetics☆202May 5, 2021Updated 5 years ago
- ☆14Dec 3, 2024Updated last year
- ☆11Feb 20, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- (Greetings_here_is_yet_another) Rate of Adaptive Protein Evolution Software☆10Jul 19, 2024Updated 2 years ago
- an R script for generating color combinations from Senzo Wada's "A Dictionary of Color Combinations"☆10Mar 18, 2019Updated 7 years ago
- A tool to calculate ploidy levels from genotype likelihoods and coverage using Hidden Markov Models☆18Sep 23, 2026Updated 3 weeks ago
- SCAT software for "Smoothed and Continuous Assignment Tests"☆29Mar 29, 2023Updated 3 years ago
- Implementation of the treeSeg algorithm as an R package.☆14Feb 2, 2026Updated 8 months ago
- ☆16May 21, 2026Updated 4 months ago
- A coalsecent simulator with selection☆22Dec 2, 2020Updated 5 years ago