silastittes / shiny_popgen
Shiny apps for teaching Population Genetics
☆62Updated 2 years ago
Alternatives and similar repositories for shiny_popgen:
Users that are interested in shiny_popgen are comparing it to the libraries listed below
- Tutorials for bioinformatics and data analysis related to landscape genomics☆26Updated 6 years ago
- Pdfs of slides from 2018 popgen course☆36Updated 6 years ago
- Repository for speciation genomics website☆24Updated 7 months ago
- A primer for computational tools to analyze genetics of populations in R☆87Updated 4 years ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆147Updated last year
- Estimating Effective Migration Surfaces☆103Updated last year
- ☆30Updated 3 years ago
- simple examples of using supervised machine learning for population genetics inference☆38Updated 7 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆57Updated 4 months ago
- ☆30Updated last week
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆42Updated this week
- Analysis of genotyping and next-generation sequencing data in medical and population genetics☆23Updated 2 years ago
- Fast and simple simulation-based population genetic inference in R☆27Updated this week
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆41Updated 5 years ago
- A set of functions to visualise genotypes based on a VCF☆85Updated 3 years ago
- UCE Bioinformatics Pipeline☆15Updated 3 months ago
- Population and Evolutionary Genetics Analysis System☆29Updated last week
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆40Updated 5 months ago
- Handy genetics-related R scripts☆31Updated 5 years ago
- Population genetic simulations in R 🌍☆56Updated last week
- a bash pipeline for RAD sequencing☆53Updated last month
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆37Updated last year
- Population assignment analysis using R☆17Updated 4 months ago
- Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…☆8Updated 5 years ago
- ☆13Updated 7 years ago
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- ☆22Updated 5 years ago