Zilong-Li / BioScriptsLinks
Cool Bioinformatics Scripts
☆11Updated last year
Alternatives and similar repositories for BioScripts
Users that are interested in BioScripts are comparing it to the libraries listed below
Sorting:
- ☆12Updated 2 years ago
- ☆9Updated 4 years ago
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆18Updated this week
- A collection of scripts I wrote when doing population genetics: calculate GC content, perform the McDonald-Kreitman test, calculate Tajim…☆9Updated last year
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated last month
- Versatile tool for detecting selective sweeps with a variety of ages, strengths, starting allele frequencies, and completeness.☆14Updated last year
- Repo to analyze population genetic data with many different methods☆15Updated 5 years ago
- a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.☆22Updated this week
- ☆15Updated 5 years ago
- MODAS: Multi-Omics Data Association Study toolkit☆21Updated 7 months ago
- ☆24Updated 2 months ago
- ☆15Updated 5 years ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆15Updated this week
- Direct RNA publication scripts☆11Updated 7 years ago
- easy_sbatch - Batch submitting Slurm jobs with script templates☆17Updated 3 years ago
- FastRemap, a C++ tool for quickly remapping reads between genome assemblies based on the commonly used CrossMap tool. Link to paper: http…☆26Updated 2 years ago
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆14Updated 3 weeks ago
- Nextflow pipeline designed for rapid onsite QC and variant calling of Oxford Nanopore data (following basecalling and demultiplexing with…☆11Updated 10 months ago
- Assemble and following pipeline used in wisent genome paper.☆17Updated 8 years ago
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆11Updated 6 years ago
- toolkit to process gtf files☆17Updated 3 years ago
- TQSLE v1.0 released☆10Updated last year
- ☆10Updated 5 years ago
- ☆13Updated 2 years ago
- This is the Haplotypo repository☆20Updated last year
- GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation☆22Updated 3 years ago
- All JBrowse plugins created by Brigitte Hofmeister☆10Updated 7 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- A Bayesian grouped mixture of regressions model capable of estimating SNP marker effect sizes for multiple outcomes simultaneously☆9Updated last year
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13Updated last year