mdayao / ramces
RAnking Markers for CEll Segmentation
☆11Updated 2 years ago
Alternatives and similar repositories for ramces:
Users that are interested in ramces are comparing it to the libraries listed below
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆28Updated 2 weeks ago
- ☆30Updated last year
- Image registration (alignment) software for large microscopy images☆22Updated last year
- Minimum Information about Tissue Imaging☆20Updated last year
- ☆11Updated this week
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆28Updated 6 months ago
- SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.☆34Updated last year
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆16Updated last week
- Interactive visualization of spatial omics data☆48Updated this week
- A plugin to visualise 3D spatial single cell omics☆22Updated 10 months ago
- ☆21Updated last year
- ☆48Updated this week
- https://harpy.readthedocs.io/en/latest/☆14Updated this week
- Piecewise alignment for layers of mosaics☆23Updated last month
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆52Updated 8 months ago
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆49Updated 2 weeks ago
- scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images☆38Updated this week
- ☆25Updated 4 months ago
- Biology-driven deep generative model for cell-type annotation in cytometry. Scyan is an interpretable model that also corrects batch-effe…☆34Updated 2 months ago
- Interoperability between SpatialData and the Xenium Explorer☆17Updated 6 months ago
- Learn morphological states of dynamic cells☆12Updated last year
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆22Updated 2 years ago
- Conditional Autoencoders for Multiplexed Pixel Analysis☆14Updated 2 years ago
- ☆31Updated 2 years ago