andreped / fast-stain-normalizationLinks
GPU-accelerated stain normalization command line tool
☆23Updated 2 years ago
Alternatives and similar repositories for fast-stain-normalization
Users that are interested in fast-stain-normalization are comparing it to the libraries listed below
Sorting:
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- ☆65Updated last year
- ☆37Updated 2 years ago
- Histopathology Image Analysis☆92Updated 2 years ago
- ☆57Updated 3 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆55Updated 3 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆107Updated this week
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆25Updated last year
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆154Updated last year
- Histopathology Slides Preprocessing Pipeline☆42Updated 7 months ago
- Toolbox for measuring adversarial robustness to many transforms☆19Updated 6 months ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆38Updated last year
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆61Updated 4 years ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆83Updated last year
- Whole Slide Image (WSI) Processing Library for Histopathological / Cytopathological Machine Learning Tasks☆24Updated 2 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- ☆71Updated 4 years ago
- Repository for "Gigapixel Whole-Slide Images Classification using Locally Supervised Learning" (MICCAI 2022)☆28Updated 3 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆69Updated 2 years ago
- Stain normalization tools for histological analysis and computational pathology☆155Updated 9 months ago
- ☆46Updated 3 years ago
- ☆101Updated last year
- RandStainNA: Simple and efficient augmentations for histology [MICCAI 2022]☆55Updated 2 years ago
- Python 3 library for the augmentation & normalization of H&E images☆62Updated 3 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆34Updated 3 years ago
- Solid Tumor Associative Modeling in Pathology☆92Updated this week
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Updated 2 years ago
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆67Updated 2 years ago
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆26Updated 3 years ago
- Re-stained whole slide image alignment☆35Updated 2 years ago