GPU-accelerated stain normalization command line tool
☆24Oct 19, 2023Updated 2 years ago
Alternatives and similar repositories for fast-stain-normalization
Users that are interested in fast-stain-normalization are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predicting Ovarian Cancer Treatment Response in Histopathology using Hierarchical Vision Transformers and Multiple Instance Learning☆12Nov 29, 2023Updated 2 years ago
- Whole Slide Images Segmentation using Patch UNet☆17Mar 30, 2020Updated 6 years ago
- Python 3 library for the augmentation & normalization of H&E images☆66Sep 12, 2022Updated 3 years ago
- This is the official code for the paper Learning Represenations with Contrastive Self-Supervised Learning for Histopathology Applications☆13Aug 17, 2022Updated 3 years ago
- HCC_Deep_learning☆19Jun 8, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Digital Pathology Whole Slide Image Analysis Toolbox☆52Apr 2, 2023Updated 3 years ago
- Stain normalization tools for histological analysis and computational pathology☆178Nov 13, 2025Updated 4 months ago
- MG-Trans: Multi-scale Graph Transformer with Information Bottleneck for Whole Slide Image Classification (TMI 2023)☆20Feb 11, 2025Updated last year
- Released code for the paper 'End-to-end Multiple Instance Learning for Whole-Slide Cytopathology of Urothelial Carcinoma'☆10Nov 24, 2021Updated 4 years ago
- Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering☆111Jun 9, 2023Updated 2 years ago
- Open source whole slide image preparation and viewing pipeline☆13Mar 16, 2020Updated 6 years ago
- cox loss function and c-index calculation with pytorch☆12Jun 15, 2019Updated 6 years ago
- source code of Inter-MIL: self-interactive multi-instance learning☆16Aug 1, 2023Updated 2 years ago
- DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image☆460Apr 29, 2024Updated last year
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- DAS-MIL: Distilling Across Scales for MILClassification of Histological WSIs☆65Nov 29, 2024Updated last year
- Remove pen-marking annotations on whole slide images(WSIs) for data achiving.☆18Aug 9, 2022Updated 3 years ago
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆59Oct 12, 2021Updated 4 years ago
- Improving Representation Learning for Histopathologic Images with Cluster Constraints☆18Jan 20, 2024Updated 2 years ago
- Solid Tumor Associative Modeling in Pathology☆116Updated this week
- ☆13Aug 16, 2024Updated last year
- Google Colab notebook for Cellpose☆10Aug 21, 2025Updated 7 months ago
- H&E histopathological staining normalization☆111Jan 24, 2020Updated 6 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆56Jun 20, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Hibou: Foundational Models for Pathology☆77Oct 23, 2024Updated last year
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆14Apr 30, 2021Updated 4 years ago
- GrandQC tool for tissue detection and quality control in pathology☆89Dec 27, 2025Updated 3 months ago
- RAnking Markers for CEll Segmentation☆12Feb 22, 2022Updated 4 years ago
- ☆56May 18, 2023Updated 2 years ago
- Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medic…☆61Mar 5, 2022Updated 4 years ago
- ☆37Feb 16, 2023Updated 3 years ago
- HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)☆94Jan 15, 2020Updated 6 years ago
- The code for Kernel attention transformer (KAT)☆35Jun 13, 2024Updated last year
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆268Dec 23, 2023Updated 2 years ago
- Preprocessing module for large histological images☆22Jun 16, 2023Updated 2 years ago
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆21Mar 25, 2022Updated 4 years ago
- a toolbox for manipulation of digital pathology slides and annotations☆19Aug 11, 2020Updated 5 years ago
- ☆105Nov 16, 2023Updated 2 years ago
- Structure preserving color normalization on H&E images using a reference image☆19Feb 2, 2025Updated last year
- Python tool for stitching histopathology tissue fragments into artificial whole-mounts.☆23Dec 5, 2025Updated 4 months ago