marcos-diazg / musicaLinks
MuSiCa - Mutational Signatures in Cancer
☆23Updated last year
Alternatives and similar repositories for musica
Users that are interested in musica are comparing it to the libraries listed below
Sorting:
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆14Updated 9 years ago
- A novel management, annotation, and machine learning framework for analyzing cancer mutations☆31Updated last year
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆20Updated 3 weeks ago
- Library for indexing VCF files for random access searches by rsID☆17Updated 3 months ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- A comprehensive gene set function enrichment tool for multiple species.☆14Updated 5 years ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Updated 6 years ago
- Targeted and non-targeted anticancer drugs and drug regimens☆29Updated last week
- ☆28Updated 7 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- ☆11Updated 2 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 6 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆12Updated 3 years ago
- ☆12Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- ☆12Updated 6 years ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 3 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Updated 4 years ago
- A fast, easy way to present complex bioinformatics pipelines to biologists☆11Updated 7 years ago
- INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads☆17Updated last year
- Subclonal Hierarchy Inference from Somatic Mutations☆21Updated 8 months ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Updated 9 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago