Javascript library for visualizing genomics data with D3.
☆19Jan 6, 2017Updated 9 years ago
Alternatives and similar repositories for gd3
Users that are interested in gd3 are comparing it to the libraries listed below
Sorting:
- A needle plot for mutation data☆27Aug 31, 2017Updated 8 years ago
- A web application from the Raphael Lab for mutation annotation and genome interpretation.☆20Feb 16, 2018Updated 8 years ago
- A cookiecutter template that reflects my favored structure for setting up Snakemake-based analysis pipelines.☆16Jul 25, 2016Updated 9 years ago
- Consensus assembly and variant calling workflow.☆12May 26, 2015Updated 10 years ago
- Interactive in-browser track viewer☆280Oct 26, 2021Updated 4 years ago
- web based visualisation of molecular interaction data☆12May 22, 2025Updated 10 months ago
- 🧬📈 Turn DNA sequences into interactive visualizations☆13Jan 20, 2023Updated 3 years ago
- Horizon chart js library for DNA data.☆62Apr 30, 2016Updated 9 years ago
- ☆14Oct 9, 2025Updated 5 months ago
- a string to graph aligner☆41Jul 5, 2016Updated 9 years ago
- An open-source high-performance web-based HTML5 genome browser. Genome Maps can be customized and allow browsing user data such as BAM an…☆38Sep 27, 2018Updated 7 years ago
- HTML5 canvas genomic graphics library☆76May 6, 2019Updated 6 years ago
- Experiments to run single cell analyses efficiently at scale using Zarr, anndata, Scanpy, and Apache Spark☆15Mar 28, 2019Updated 6 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- ☆20Feb 24, 2017Updated 9 years ago
- Bayesian Consensus Clustering, packaged up from code by Eric F. Lock☆19Jun 15, 2023Updated 2 years ago
- s3 driver for hdf5 1.8 and 1.10☆17Jun 25, 2019Updated 6 years ago
- Some sleuth walkthroughs to help you get started☆10Jul 26, 2018Updated 7 years ago
- Bioinformatics pipelines for Resolwe☆19Feb 16, 2026Updated last month
- distributed parallel query engine, based on fdw and hooks of PG☆12Dec 4, 2014Updated 11 years ago
- home of the bear's lair☆10May 19, 2017Updated 8 years ago
- Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.☆49Updated this week
- Easily create reusable command line scripts with R☆13Mar 31, 2021Updated 4 years ago
- Analysis notebooks for "SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes".☆14Nov 20, 2020Updated 5 years ago
- ☆12May 4, 2022Updated 3 years ago
- Development configuration for @evantravers☆43Jan 17, 2020Updated 6 years ago
- A fast python class for reading 2-bit files (used by UCSC genome browser)☆14Oct 10, 2025Updated 5 months ago
- Data portal for exploring and accessing data☆16Oct 30, 2023Updated 2 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Nov 26, 2025Updated 3 months ago
- A web application framework for analysis and visualization of High throughput Sequencing metagenomic data☆10Nov 21, 2016Updated 9 years ago
- Talon docs.☆13Mar 2, 2020Updated 6 years ago
- R package for inferring copy number from read depth☆33Sep 30, 2022Updated 3 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Mar 25, 2022Updated 3 years ago
- ☆69Jun 21, 2022Updated 3 years ago
- Interface to 10x Genomics' 1.3 m single cell data set☆18Aug 2, 2018Updated 7 years ago
- Grammars pulled out of aenea as preparation for merging all grammars.☆17Dec 20, 2018Updated 7 years ago
- Examples of kallisto + sleuth☆11May 18, 2017Updated 8 years ago
- Eve Neo4j extension☆10Dec 29, 2019Updated 6 years ago
- R snippets for Sublimetext☆14May 12, 2017Updated 8 years ago