A fast python class for reading 2-bit files (used by UCSC genome browser)
☆14Jun 22, 2026Updated last week
Alternatives and similar repositories for twobitreader
Users that are interested in twobitreader are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Jun 3, 2022Updated 4 years ago
- ☆12Feb 19, 2017Updated 9 years ago
- Convert 23andMe data to VCFs☆10Aug 8, 2016Updated 9 years ago
- Are you being “Comcast-ed”? Test your speed every 5min and see if you're getting what you're paying.☆12Oct 26, 2017Updated 8 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- The python binding for D4 format☆16Oct 22, 2021Updated 4 years ago
- DEPRECATED: Store and query public TCGA data☆11Sep 15, 2016Updated 9 years ago
- Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi☆12May 19, 2026Updated last month
- MuSiCa - Mutational Signatures in Cancer☆23Dec 23, 2023Updated 2 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆17Jul 6, 2023Updated 2 years ago
- ☆10Mar 15, 2024Updated 2 years ago
- Material for introductory course on using Blender for 3D printing☆11Jun 22, 2016Updated 10 years ago
- Vesalius: Dissecting Tissue Anatomy from Spatial Transcriptomic Data☆20Jan 26, 2026Updated 5 months ago
- Unix-based RNA-seq quantification pipeline☆10Nov 18, 2015Updated 10 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- MusMorph, a database of standardized mouse morphology data for morphometric meta-analyses.☆11Jul 25, 2024Updated last year
- A python library for accessing 2bit files☆21Apr 21, 2026Updated 2 months ago
- Creating virtual environments for R.☆17Oct 24, 2019Updated 6 years ago
- Code for the image processing and analysis described our Nature Protocols paper.☆10Jun 26, 2015Updated 11 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Apr 8, 2016Updated 10 years ago
- Analysis notebooks for "SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes".☆14Nov 20, 2020Updated 5 years ago
- VCF (variant call format) parser☆26Jun 2, 2026Updated 3 weeks ago
- MRtree R implementation☆14Mar 1, 2023Updated 3 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Aug 9, 2019Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning wit…☆68Dec 14, 2022Updated 3 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Jun 16, 2026Updated 2 weeks ago
- Python module to read binary Plink files.☆17Mar 25, 2026Updated 3 months ago
- convert CHAIN format to PAF format☆15Dec 17, 2024Updated last year
- A visualization app for 3D-registered data processed in ABBA and QuPath☆20Oct 21, 2022Updated 3 years ago
- Tools for communicating with Intel Management Engine through MEI (HECI)☆13Jul 27, 2017Updated 8 years ago
- ☆29Sep 4, 2023Updated 2 years ago
- Retrieve data in genomic intervals with a Python interface for tabix.☆82Aug 10, 2017Updated 8 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Mar 25, 2022Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆12Jul 15, 2022Updated 3 years ago
- ☆11May 22, 2025Updated last year
- Exploration of controlled loss of quality values for compressing CRAM files☆36Feb 23, 2023Updated 3 years ago
- A command line tool that uses a Boolean calculus of calendars for computing availability (currently supports Google Calendar API)☆24Nov 3, 2021Updated 4 years ago
- Use Thor's Axe to cut exons into their evolutionary building blocks☆12Jun 14, 2026Updated 2 weeks ago
- Secure Cloud Object REsource: file transfer microservice☆20May 25, 2026Updated last month
- VT3D: a versatile Visualization Toolbox for 3D spatial transcriptomics atlas☆14Nov 6, 2024Updated last year