☆17Nov 23, 2021Updated 4 years ago
Alternatives and similar repositories for DriverML
Users that are interested in DriverML are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17May 15, 2024Updated 2 years ago
- Quality control on genetic variants from next-generation sequencing data using random forest☆20May 26, 2022Updated 4 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆14Nov 12, 2019Updated 6 years ago
- ☆21Sep 4, 2020Updated 5 years ago
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆17Mar 4, 2019Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- a modified version of FunSeq2 using new data context☆15Aug 18, 2022Updated 3 years ago
- extract SV signal from a BAM☆11Jul 26, 2018Updated 7 years ago
- Snakemake workflow for somatic mutation detection without matched normal samples☆13Mar 4, 2023Updated 3 years ago
- Kdrew's scripts for handling protein complex map data☆14Jun 17, 2026Updated last month
- Bioinformatics scripts☆14Dec 23, 2024Updated last year
- A CNN - based pipeline for calling somatic SNP and INDEL variants without a matched normal☆11Sep 7, 2022Updated 3 years ago
- A Weighted Exact Test for Mutually Exclusive Mutations in Cancer☆21Sep 30, 2018Updated 7 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Dec 23, 2023Updated 2 years ago
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆11Apr 30, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Pipeline for RNA and DNA integrated analysis for somatic mutation detection☆13Jul 1, 2026Updated 2 weeks ago
- cDriver R package for finding candidate driver genes in cancers☆18Jan 18, 2018Updated 8 years ago
- FInding REliable Variants without ArTifacts☆23Nov 18, 2022Updated 3 years ago
- Genomic VCF to tab-separated values☆49May 23, 2026Updated last month
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆22Feb 10, 2023Updated 3 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Dec 8, 2020Updated 5 years ago
- QBRC Somatic Mutation Calling Pipeline☆16Feb 8, 2022Updated 4 years ago
- ☆29Feb 17, 2021Updated 5 years ago
- Web application for Rxivist, the site that makes it easier to find the most talked-about papers on bioRxiv.org☆10Mar 1, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Methods for mapping genomic data onto 3D protein structure.☆28May 17, 2022Updated 4 years ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆99Apr 20, 2026Updated 3 months ago
- ☆19Updated this week
- Concordance and contamination estimator for tumor–normal pairs☆60Oct 22, 2024Updated last year
- a Shiny/R application to view and annotate copy number variations☆28Mar 8, 2023Updated 3 years ago
- Remove primer sequence from BAM alignments by soft-clipping☆30Dec 5, 2019Updated 6 years ago
- A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data☆12Feb 1, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bootstrap imputation for scRNAseq data☆12Jul 18, 2020Updated 6 years ago
- Compute a 2D embedding of a data matrix given supervised class information.☆12Dec 8, 2019Updated 6 years ago
- Copy number calling and variant classification using targeted short read sequencing☆149Feb 19, 2026Updated 5 months ago
- Scripts supporting identification of genomic features affecting survival time in cancer☆14Dec 6, 2018Updated 7 years ago
- Python CLI to convert between zero and one based genomic coordinate systems☆23Jul 27, 2018Updated 7 years ago
- HLA-II ligand predictor.☆49Updated this week
- 天津医科大学，生物医学工程与技术学院，《系统生物学》课程资料☆14Jul 8, 2026Updated last week