Script to download FASTA chromosome sequences from UCSC and combine them in one single FASTA file
☆16Apr 24, 2018Updated 8 years ago
Alternatives and similar repositories for ucsc-hg19-fasta
Users that are interested in ucsc-hg19-fasta are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆24May 21, 2026Updated last week
- MuSiCa - Mutational Signatures in Cancer☆23Dec 23, 2023Updated 2 years ago
- ☆27May 22, 2026Updated last week
- 🌓 Allele specific analyses across cell states and conditions☆10Nov 28, 2022Updated 3 years ago
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Codes and Data for FFPEsig manuscript☆17Jan 17, 2024Updated 2 years ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆11Mar 11, 2020Updated 6 years ago
- ☆17Apr 9, 2021Updated 5 years ago
- An R wrapper for SigProfilerExtractor that allows de novo extraction of mutational signatures from data generated in a matrix format. The…☆15Jan 29, 2026Updated 4 months ago
- DEPRECATED: Use Cenote-Taker 3 instead☆14Jan 19, 2024Updated 2 years ago
- ☆14May 26, 2020Updated 6 years ago
- JEME method for predicting enhancer targets☆11Jul 15, 2017Updated 8 years ago
- Browser for ExAC consortium data☆12Oct 23, 2017Updated 8 years ago
- ☆12Jun 28, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆15Mar 1, 2026Updated 2 months ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- Example of GPU-accelerated machine learning on the RCS compute cluster using Jupyter and conda☆11Aug 6, 2020Updated 5 years ago
- Search for activating regulatory variants in the tumor genome☆15Apr 11, 2025Updated last year
- CGM 主站☆11Mar 10, 2025Updated last year
- Docker image for the DeepBind method.☆16Nov 7, 2015Updated 10 years ago
- Pan-transcriptomic phenotyping☆19May 12, 2026Updated 2 weeks ago
- Genome databases generation pipeline for ngs.plot and region_analysis.☆17Sep 8, 2015Updated 10 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- ☆12Apr 15, 2025Updated last year
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆18Mar 20, 2023Updated 3 years ago
- Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Prediction☆13Jun 20, 2017Updated 8 years ago
- ☆18Apr 6, 2022Updated 4 years ago
- Code for the spatial transcriptomic paper on IPF lungs☆22Jul 18, 2024Updated last year
- ☆18Sep 6, 2022Updated 3 years ago
- Application for semi-automated genomic annotation.☆18Apr 16, 2026Updated last month
- Pipeline for the analysis of PE ChIP-seq data☆15Jul 20, 2020Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A suite for the analysis of CLIP-Seq datasets.☆12Jan 31, 2022Updated 4 years ago
- Workflow4Metabolomics meta repository☆11May 23, 2025Updated last year
- Single-Cell Inference of Class Switch Recombination☆22Feb 11, 2026Updated 3 months ago
- ☆20Jul 6, 2021Updated 4 years ago
- A series of scripts to automate sequence workflows☆19Apr 7, 2026Updated last month
- Build Annotation package by using information from KEGG, NCBI, Ensembl☆15May 4, 2023Updated 3 years ago
- ☆17Jul 19, 2024Updated last year