Script to download FASTA chromosome sequences from UCSC and combine them in one single FASTA file
☆16Apr 24, 2018Updated 8 years ago
Alternatives and similar repositories for ucsc-hg19-fasta
Users that are interested in ucsc-hg19-fasta are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Sep 12, 2017Updated 8 years ago
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆24Jul 8, 2026Updated last week
- ☆26Jun 4, 2025Updated last year
- MuSiCa - Mutational Signatures in Cancer☆23Dec 23, 2023Updated 2 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆28Jun 14, 2026Updated last month
- 🌓 Allele specific analyses across cell states and conditions☆11Nov 28, 2022Updated 3 years ago
- Codes and Data for FFPEsig manuscript☆17Jan 17, 2024Updated 2 years ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆12Mar 11, 2020Updated 6 years ago
- An R wrapper for SigProfilerExtractor that allows de novo extraction of mutational signatures from data generated in a matrix format. The…☆15Jan 29, 2026Updated 5 months ago
- ☆17Apr 9, 2021Updated 5 years ago
- ☆14May 26, 2020Updated 6 years ago
- JEME method for predicting enhancer targets☆11Jul 15, 2017Updated 9 years ago
- A comprehensive platform for population-scale genomic analyses☆10Apr 20, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Browser for ExAC consortium data☆12Oct 23, 2017Updated 8 years ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- ☆15Jun 24, 2017Updated 9 years ago
- ☆12Jun 28, 2024Updated 2 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- Domain adaptation networks for digit recognitioning☆14Oct 6, 2017Updated 8 years ago
- Pan-transcriptomic phenotyping☆19May 12, 2026Updated 2 months ago
- Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Prediction☆13Jun 20, 2017Updated 9 years ago
- ☆13Nov 21, 2019Updated 6 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆16Oct 1, 2024Updated last year
- Docker image for the DeepBind method.☆16Nov 7, 2015Updated 10 years ago
- Search for activating regulatory variants in the tumor genome☆15Apr 11, 2025Updated last year
- DUBStepR (Determining the Underlying Basis using Step-wise Regression) is a feature selection algorithm for cell type identification in s…☆12May 26, 2021Updated 5 years ago
- Crossfilter / DC.js for pandas DataFrames in the Jupyter notebook☆17Apr 20, 2016Updated 10 years ago
- Simulator for structural variants in various types of next-generation sequencing data☆11Mar 21, 2017Updated 9 years ago
- ☆14Dec 23, 2024Updated last year
- Genome databases generation pipeline for ngs.plot and region_analysis.☆17Sep 8, 2015Updated 10 years ago
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆12Apr 15, 2025Updated last year
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆18Mar 20, 2023Updated 3 years ago
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated last year
- This is the complete code base used in Robert A. Edwards, Katelyn McNair, Karoline Faust, Jeroen Raes, and Bas E. Dutilh (2015) Computati…☆17Nov 7, 2021Updated 4 years ago
- Kivy port of Dataframe GUI module. Original wxPython implementation can be found here: https://github.com/bluenote10/PandasDataFrameGUI☆11Aug 10, 2020Updated 5 years ago
- Application for semi-automated genomic annotation.☆19Jun 10, 2026Updated last month
- Single-Cell Inference of Class Switch Recombination☆24Jun 19, 2026Updated last month