gagneurlab / splicemapLinks
☆20Updated 8 months ago
Alternatives and similar repositories for splicemap
Users that are interested in splicemap are comparing it to the libraries listed below
Sorting:
- Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation☆21Updated 3 months ago
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆13Updated 3 years ago
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆29Updated 11 months ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆23Updated last year
- Enabling differential allele-specific analysis☆11Updated 5 months ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Updated 2 years ago
- A tool for sample swap identification in high throughput sequencing studies☆10Updated 3 months ago
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆16Updated 3 years ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆18Updated 2 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆17Updated 5 years ago
- BAMixChecker: A fast and efficient tool for sample matching checkup☆14Updated 3 years ago
- ☆22Updated 6 months ago
- Structural variant VCF annotation, duplicate removal and comparison☆33Updated 4 months ago
- ☆13Updated 3 weeks ago
- ☆20Updated last year
- Improving gene isoform quantification with miniQuant☆19Updated last month
- ☆23Updated 4 years ago
- ☆36Updated 2 years ago
- ☆19Updated 2 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 7 years ago
- Integrative analysis of complex structural variants☆21Updated 4 years ago
- ☆13Updated 2 years ago
- Workflow for Sequenza, cellularity and ploidy☆19Updated 2 weeks ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆18Updated last week
- A method for measuring chromosome-specific telomere length from long reads☆21Updated last year
- Genotyping of segregating mobile elements insertions☆19Updated 3 years ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆18Updated 3 months ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆12Updated 5 years ago