Alternatives and similar repositories for AFEchidna

Users that are interested in AFEchidna are comparing it to the libraries listed below

• perpdgo / lme4GS
  lme4 for Genomic Selection
  ☆18Updated 4 years ago
• vangiangtran / BWGS
  2024 BreedWheat Genomic Selection pipeline
  ☆13Updated last year
• jendelman / StageWise
  two-stage analysis of multi-environment trials for genomic selection and GWAS
  ☆27Updated 5 months ago
• famuvie / breedR
  Statistical methods for forest genetic resources analysts
  ☆35Updated 11 months ago
• mighster / BLUPs_Heritability
  ☆16Updated 6 years ago
• YaoLab-Bioinfo / MaizeSNPDB
  A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines
  ☆13Updated 2 years ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆151Updated last year
• TiagoOlivoto / metan
  Package for multi-environment trial analysis
  ☆34Updated 9 months ago
• GuangchuangYu / plotting_tree_with_data
  Two methods for mapping and visualizing associated data on phylogeny using ggtree
  ☆12Updated 6 years ago
• TXiang-lab / blupADC
  blupADC:An useful tool for animal and plant breeding
  ☆28Updated 8 months ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated last month
• cran / sommer
   This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…
  ☆16Updated last month
• YTLogos / BnaSNPDB
  An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions
  ☆13Updated 4 months ago
• amkusmec / FarmCPUpp
  Perform GWAS using the FarmCPU model.
  ☆23Updated 7 months ago
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆94Updated 3 weeks ago
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆193Updated 5 months ago
• grunwaldlab / Population_Genetics_in_R
  A primer for computational tools to analyze genetics of populations in R
  ☆87Updated 4 years ago
• PaulSchmidtGit / Heritability
  Heritability in plant breeding - R and SAS code examples
  ☆33Updated 4 years ago
• maize-genetics / rTASSEL
  R front-end for TASSEL 5
  ☆31Updated 3 months ago
• Biometris / statgenGxE
  See https://biometris.github.io/statgenGxE for a full description
  ☆11Updated 2 weeks ago
• gmteunisse / ggnested
  ggplots for nested data
  ☆10Updated last year
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated 8 months ago
• XiaoLuo-boy / ggheatmap
  ggplot2 version of heatmap
  ☆90Updated 2 years ago
• cooplab / Popgen_teaching_code
  ☆52Updated 3 years ago
• helixcn / EcoEvoLinks
  Links for Ecology and Evolution
  ☆23Updated 6 years ago
• Tom-Jenkins / mapmixture
  R package and web app for spatial visualisation of admixture on a projected map
  ☆44Updated 3 months ago
• jendelman / polyBreedR
  Using genome-wide markers for polyploid breeding
  ☆11Updated 6 months ago
• bulksoil / BioProtocol
  Repo for a Microbiome Protocol
  ☆10Updated 7 years ago
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆113Updated last week
• gdlc / BGLR-R
  ☆108Updated 2 weeks ago