Alternatives and similar repositories for AFEchidna

Users that are interested in AFEchidna are comparing it to the libraries listed below

• perpdgo / lme4GS
  lme4 for Genomic Selection
  ☆18Updated 4 years ago
• vangiangtran / BWGS
  2024 BreedWheat Genomic Selection pipeline
  ☆13Updated 2 years ago
• famuvie / breedR
  Statistical methods for forest genetic resources analysts
  ☆36Updated last year
• jendelman / StageWise
  two-stage analysis of multi-environment trials for genomic selection and GWAS
  ☆28Updated 3 weeks ago
• mighster / BLUPs_Heritability
  ☆16Updated 6 years ago
• TiagoOlivoto / metan
  Package for multi-environment trial analysis
  ☆37Updated last year
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆72Updated 3 months ago
• YaoLab-Bioinfo / MaizeSNPDB
  A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines
  ☆14Updated 3 years ago
• cran / sommer
   This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…
  ☆16Updated last month
• GuangchuangYu / plotting_tree_with_data
  Two methods for mapping and visualizing associated data on phylogeny using ggtree
  ☆12Updated 7 years ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆149Updated 2 weeks ago
• TXiang-lab / blupADC
  blupADC:An useful tool for animal and plant breeding
  ☆31Updated last year
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆198Updated 11 months ago
• PaulSchmidtGit / Heritability
  Heritability in plant breeding - R and SAS code examples
  ☆39Updated 4 years ago
• YTLogos / BnaSNPDB
  An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions
  ☆14Updated 10 months ago
• gdlc / BGLR-R
  ☆111Updated 3 months ago
• maize-genetics / rTASSEL
  R front-end for TASSEL 5
  ☆31Updated last month
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆96Updated 2 months ago
• amkusmec / FarmCPUpp
  Perform GWAS using the FarmCPU model.
  ☆24Updated last year
• Biometris / statgenGxE
  See https://biometris.github.io/statgenGxE for a full description
  ☆11Updated last month
• grunwaldlab / Population_Genetics_in_R
  A primer for computational tools to analyze genetics of populations in R
  ☆89Updated 4 years ago
• jendelman / polyBreedR
  Using genome-wide markers for polyploid breeding
  ☆12Updated 2 weeks ago
• Rpedigree / pedigreeTools
  R functions related to pedigrees
  ☆14Updated 3 months ago
• crWerner / fieldsimr
  ☆14Updated 5 months ago
• luansheng / visPedigree
  Tidying and visualization for animal pedigree
  ☆19Updated this week
• cooplab / Popgen_teaching_code
  ☆56Updated 3 years ago
• masuday / Blupf90TutorialStandard
  A tutorial of the BLUPF90 family programs
  ☆25Updated 8 months ago
• gaynorr / AlphaSimR
  R package for breeding program simulations
  ☆57Updated 3 weeks ago
• YuLab-SMU / scatterpie
  scatter pie plot
  ☆66Updated 3 months ago
• priviere / PPBstats
  A R package for Participatory Plant Breeding statisticial analyses
  ☆10Updated 4 years ago