R package for fitting high-dimensional multivariate linear mixed effect models
☆40Oct 20, 2025Updated 9 months ago
Alternatives and similar repositories for MegaLMM
Users that are interested in MegaLMM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Added functions for Echidna in R☆11Apr 14, 2023Updated 3 years ago
- GridLMM package☆39Oct 16, 2025Updated 9 months ago
- This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…☆16Jul 9, 2026Updated last month
- ☆60Apr 5, 2026Updated 4 months ago
- See https://biometris.github.io/LMMsolver for a full description☆18Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- lme4 for Genomic Selection☆18Jan 26, 2026Updated 6 months ago
- ☆116Jul 16, 2026Updated 3 weeks ago
- An R package to run stochastic simulations of breeding scheme genetics☆10Nov 20, 2025Updated 8 months ago
- ☆12Jun 26, 2026Updated last month
- Bison-Fly is the NDSU Spring Wheat UAV Pipeline developed in partnership with Drone2Phenome UAV community (D2P). In this pipeline we are …☆32Aug 12, 2024Updated last year
- 2024 BreedWheat Genomic Selection pipeline☆15Jan 3, 2024Updated 2 years ago
- Fitting latent factor mixed models☆13Jun 12, 2020Updated 6 years ago
- R package for fast maximum-likelihood estimation of mixture proportions using SQP.☆11Dec 21, 2023Updated 2 years ago
- ☆19Sep 20, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- two-stage analysis of multi-environment trials for genomic selection and GWAS☆31May 18, 2026Updated 2 months ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆33Mar 23, 2026Updated 4 months ago
- R front-end for TASSEL 5☆34Updated this week
- Multivariate Gaussian Models for Genomic and Pedigree Data☆14May 23, 2020Updated 6 years ago
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Dec 7, 2022Updated 3 years ago
- repository for code used in analysis of open wild wheat consortium☆20Nov 23, 2021Updated 4 years ago
- ☆14Jul 11, 2026Updated last month
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Jan 20, 2025Updated last year
- See https://biometris.github.io/statgenGxE for a full description☆13Nov 12, 2025Updated 8 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Large-scale Bayesian variable selection for R and MATLAB.☆42Mar 22, 2023Updated 3 years ago
- Using genome-wide markers for polyploid breeding☆13May 2, 2026Updated 3 months ago
- An innovative GWAS procedure for studies on germplasm population and plant breeding☆14Nov 16, 2020Updated 5 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆26Aug 20, 2024Updated last year
- ☆24Aug 6, 2021Updated 5 years ago
- An R package for multivariate adaptive shrinkage.☆99Nov 7, 2024Updated last year
- Simple and flexible manipulation of genomic data.☆16Apr 16, 2025Updated last year
- Julia for Whole-genome Analysis Software☆107Jul 12, 2026Updated 3 weeks ago
- Gene Environment Interaction Estimator☆13Dec 11, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- Scalable Ultra-Sparse Bayesian PCA☆32Feb 13, 2024Updated 2 years ago
- Toy simulations and analyses of heritability and genetic differences☆11Jul 17, 2024Updated 2 years ago
- ☆14Nov 4, 2024Updated last year
- An R package to compute relationship matrices for diploid and autotetraploid species☆25Dec 12, 2025Updated 7 months ago
- Mixed models @lme4 + custom covariances + parameter constraints☆54Jan 7, 2021Updated 5 years ago
- A faster and angrier package for EBMF.☆17Jul 1, 2026Updated last month