deruncie / MegaLMM
R package for fitting high-dimensional multivariate linear mixed effect models
☆38Updated 7 months ago
Alternatives and similar repositories for MegaLMM:
Users that are interested in MegaLMM are comparing it to the libraries listed below
- GridLMM package☆39Updated last month
- Mixed models @lme4 + custom covariances + parameter constraints☆53Updated 4 years ago
- Simulation of Pleiotropic, Linked and Epistatic Phenotypes☆13Updated last year
- Quantitative Trait Cluster Association Test in R☆25Updated 4 years ago
- An R package for multivariate adaptive shrinkage.☆92Updated 6 months ago
- lme4 for Genomic Selection☆17Updated 4 years ago
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆50Updated last month
- Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]☆17Updated last year
- Effective Computing—Resources for Computational Biologists☆26Updated 5 years ago
- ☆47Updated 2 weeks ago
- This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…☆16Updated last month
- QTL analysis software for high-dimensional data and complex cross designs☆34Updated 2 months ago
- Bayesian hierarchical model for complex trait analysis☆44Updated last year
- ☆108Updated 2 weeks ago
- An R package to compute relationship matrices for diploid and autotetraploid species☆18Updated last year
- ☆52Updated 3 years ago
- Generalized linear Mixed Model Association Tests☆42Updated last year
- Parallel Genomic evaluations in R☆17Updated 7 months ago
- A Suite of Packages for Analysis of Big Genomic Data☆34Updated 3 months ago
- A matrix-like wrapper around PLINK .bed files☆18Updated 8 months ago
- ☆29Updated last year
- Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction☆42Updated last month
- Learn and validate subtypes from multiple traits☆20Updated 3 years ago
- Grid and ggplot2 based visualization for biological data☆112Updated last year
- Perform GWAS using the FarmCPU model.☆23Updated 4 months ago
- R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)☆106Updated 5 months ago
- Using genome-wide markers for polyploid breeding☆11Updated 4 months ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆30Updated 2 months ago
- fastqcr: Quality Control of Sequencing Data☆73Updated last year
- genotype dimensionality reduction with a VAE☆43Updated 2 months ago