R package for fitting high-dimensional multivariate linear mixed effect models
☆38Oct 20, 2025Updated 6 months ago
Alternatives and similar repositories for MegaLMM
Users that are interested in MegaLMM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Added functions for Echidna in R☆11Apr 14, 2023Updated 3 years ago
- GridLMM package☆39Oct 16, 2025Updated 6 months ago
- ☆59Apr 5, 2026Updated 3 weeks ago
- See https://biometris.github.io/LMMsolver for a full description☆18Apr 25, 2026Updated last week
- R package for breeding program simulations☆65Apr 21, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- lme4 for Genomic Selection☆18Jan 26, 2026Updated 3 months ago
- ☆114Oct 3, 2025Updated 6 months ago
- ☆11Updated this week
- repository for code used in analysis of open wild wheat consortium☆19Nov 23, 2021Updated 4 years ago
- 2024 BreedWheat Genomic Selection pipeline☆15Jan 3, 2024Updated 2 years ago
- Julia for Whole-genome Analysis Software☆106Apr 19, 2026Updated last week
- Bison-Fly is the NDSU Spring Wheat UAV Pipeline developed in partnership with Drone2Phenome UAV community (D2P). In this pipeline we are …☆31Aug 12, 2024Updated last year
- R package for fast maximum-likelihood estimation of mixture proportions using SQP.☆11Dec 21, 2023Updated 2 years ago
- ☆19Sep 20, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction☆47Apr 8, 2025Updated last year
- two-stage analysis of multi-environment trials for genomic selection and GWAS☆29Apr 12, 2026Updated 2 weeks ago
- R front-end for TASSEL 5☆33Apr 1, 2026Updated last month
- DeepGS is a R package for predicting phenotypes from genotypes using deep learning techniques.☆56Dec 3, 2021Updated 4 years ago
- Web application for field trial analysis.☆40Sep 29, 2025Updated 7 months ago
- Package for multi-environment trial analysis☆39Oct 16, 2024Updated last year
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Dec 7, 2022Updated 3 years ago
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Jan 20, 2025Updated last year
- ☆14Feb 16, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Code for "Using machine learning to combine genetic and environmental data for maize grain yield predictions across multi-environment tri…☆19Jul 23, 2024Updated last year
- An innovative GWAS procedure for studies on germplasm population and plant breeding☆14Nov 16, 2020Updated 5 years ago
- Using genome-wide markers for polyploid breeding☆12Apr 5, 2026Updated 3 weeks ago
- Plant breeding simulations with AlphaSimR☆28Jan 5, 2025Updated last year
- Zhou & Stephens (2014) GEMMA multivariate linear mixed model☆13Oct 24, 2020Updated 5 years ago
- ☆24Aug 6, 2021Updated 4 years ago
- Large-scale Bayesian variable selection for R and MATLAB.☆41Mar 22, 2023Updated 3 years ago
- An R package for multivariate adaptive shrinkage.☆97Nov 7, 2024Updated last year
- ☆20Feb 24, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Multivariate Gaussian Models for Genomic and Pedigree Data☆14May 23, 2020Updated 5 years ago
- A new model and algorithm for multivariate Bayesian variable selection regression.☆28Updated this week
- See https://biometris.github.io/statgenGxE for a full description☆12Nov 12, 2025Updated 5 months ago
- Simple and flexible manipulation of genomic data.☆16Apr 16, 2025Updated last year
- Mixed Models for Agriculture in R☆17Feb 12, 2026Updated 2 months ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆25Aug 20, 2024Updated last year
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year