rramadeu / AGHmatrixLinks
An R package to compute relationship matrices for diploid and autopolyploid species
☆11Updated 7 months ago
Alternatives and similar repositories for AGHmatrix
Users that are interested in AGHmatrix are comparing it to the libraries listed below
Sorting:
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆31Updated 3 months ago
- Process MS results in R, in a tidy way☆17Updated 7 years ago
- QTL analysis in diallel populations☆12Updated last year
- This is a read-only mirror of the CRAN R package repository. sommer — Solving Mixed Model Equations in R. Homepage: https://github.com/…☆16Updated last month
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- R package for pedigree inference based on SNP data☆26Updated last year
- Parallel Genomic evaluations in R☆17Updated 9 months ago
- Fitting latent factor mixed models☆13Updated 5 years ago
- ☆30Updated 3 weeks ago
- QTL mapping in outcrossing species using CIM☆10Updated last year
- R package to estimate kinship and FST from SNP data☆21Updated 8 months ago
- R functions related to pedigrees☆12Updated 11 months ago
- Fast and simple simulation-based population genetic inference in R☆27Updated 2 weeks ago
- A Framework for Coalescent Simulation in R☆23Updated last year
- Effective Computing—Resources for Computational Biologists☆26Updated 5 years ago
- An R package for reproducible and automated ADMIXTOOLS analyses☆32Updated 4 months ago
- Using genome-wide markers for polyploid breeding☆11Updated 5 months ago
- An R package to detect selection in biological pathways☆14Updated last year
- A smorgasbord of R functions for population genomic analyses☆18Updated 3 weeks ago
- ☆48Updated 3 weeks ago
- Genetic maps in autopolyploids☆29Updated last month
- initial commit☆26Updated 2 years ago
- starmie: plotting and inference for population structure models☆13Updated 6 years ago
- Tools for describing and manipulating demographic models.☆19Updated last month
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆41Updated 9 months ago
- A tutorial of the BLUPF90 family programs☆23Updated last month
- lme4 for Genomic Selection☆18Updated 4 years ago
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆43Updated 2 months ago
- https://filippob.github.io/introduction_to_gwas/☆20Updated this week
- Perform GWAS using the FarmCPU model.☆23Updated 6 months ago