jendelman / polyBreedRLinks
Using genome-wide markers for polyploid breeding
☆11Updated 5 months ago
Alternatives and similar repositories for polyBreedR
Users that are interested in polyBreedR are comparing it to the libraries listed below
Sorting:
- ☆30Updated last month
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆31Updated 2 months ago
- GWAS software that can handle autopolyploids☆28Updated 7 months ago
- Shiny apps for teaching Population Genetics☆65Updated 2 years ago
- Genetic maps in autopolyploids☆29Updated last week
- Tutorials for bioinformatics and data analysis related to landscape genomics☆28Updated 6 years ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- https://filippob.github.io/introduction_to_gwas/☆20Updated 11 months ago
- R package for random-effect multiple QTL mapping in autopolyploids☆9Updated 3 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆40Updated 8 months ago
- QTL analysis in diallel populations☆12Updated last year
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆29Updated 7 months ago
- Simulation of Pleiotropic, Linked and Epistatic Phenotypes☆13Updated last year
- Population and Evolutionary Genetics Analysis System☆28Updated 3 months ago
- Perform GWAS using the FarmCPU model.☆23Updated 5 months ago
- ☆35Updated 3 years ago
- Population genetic simulations in R 🌍☆59Updated this week
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆60Updated last month
- ☆10Updated 4 years ago
- ☆16Updated 2 years ago
- R interface to the JBrowse 2 Linear Genome View.☆37Updated last year
- An R package for reproducible and automated ADMIXTOOLS analyses☆32Updated 3 months ago
- Fitting latent factor mixed models☆13Updated 4 years ago
- Repository for speciation genomics website☆25Updated 10 months ago
- A primer for computational tools to analyze genetics of populations in R☆86Updated 4 years ago
- R package for pedigree inference based on SNP data☆26Updated 11 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- R functions related to pedigrees☆11Updated 11 months ago
- Simple and flexible manipulation of genomic data.☆16Updated last month
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆19Updated 7 years ago