LDeng0205 / StaB-ddGLinks
Predicting mutational effects on protein binding from folding energy. ICML 2025.
☆40Updated 6 months ago
Alternatives and similar repositories for StaB-ddG
Users that are interested in StaB-ddG are comparing it to the libraries listed below
Sorting:
- Extension of ThermoMPNN for double mutant predictions☆53Updated 4 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆61Updated 8 months ago
- Code for humanization of antibody and nanobody☆74Updated 5 months ago
- ☆45Updated 10 months ago
- protein structure generation with sparse all-atom denoising models☆59Updated 2 months ago
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆32Updated 3 years ago
- ☆76Updated 8 months ago
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆60Updated last week
- code for SeqDance/ESMDance, biophysics-informed protein language models☆53Updated 2 weeks ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆47Updated 3 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆47Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆70Updated 7 months ago
- ☆66Updated 3 months ago
- Protein stability prediction using rewired protein generative models☆61Updated last month
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆108Updated 2 weeks ago
- Code for designing biased protein states☆59Updated 2 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆133Updated 3 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆37Updated last year
- ☆37Updated 2 years ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆52Updated 2 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆43Updated last year
- ☆86Updated last month
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆85Updated last year
- ☆54Updated 2 months ago
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆26Updated 11 months ago
- ☆47Updated last year
- Composing Unbalanced Flows for Flexible Docking and Relaxation (ICLR 2025)☆54Updated 7 months ago
- ☆74Updated 10 months ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆57Updated last month
- Official repository of GENzyme☆61Updated last year