Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
☆61Oct 25, 2023Updated 2 years ago
Alternatives and similar repositories for ab_opt
Users that are interested in ab_opt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- EvolveX, a de novo antibody computational design pipeline.☆23Sep 18, 2025Updated 7 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆37Nov 7, 2024Updated last year
- Generative Language Modeling for Antibody Design☆187Oct 5, 2024Updated last year
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆357Jun 29, 2023Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆129Feb 26, 2025Updated last year
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Code for humanization of antibody and nanobody☆78Aug 28, 2025Updated 7 months ago
- Predict the structure of immune receptor proteins☆178Nov 11, 2025Updated 5 months ago
- ☆109Apr 1, 2023Updated 3 years ago
- ☆135Aug 8, 2024Updated last year
- ☆17Jan 5, 2024Updated 2 years ago
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Sep 18, 2023Updated 2 years ago
- Knowledge graph enhanced LLM for binding affinity prediction☆14Aug 20, 2024Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆93Jun 11, 2025Updated 10 months ago
- Machine learning-driven antibody design☆63Jul 5, 2023Updated 2 years ago
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.☆12Dec 28, 2023Updated 2 years ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆413Sep 3, 2023Updated 2 years ago
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆55Nov 14, 2023Updated 2 years ago
- Sapiens is a human antibody language model based on BERT.☆73Jan 22, 2026Updated 2 months ago
- Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints☆51Jun 30, 2025Updated 9 months ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 11 months ago
- AbEpiTope-1.0 is a computational tool that features two scores: AbEpiScore-1.0, designed for assessing the accuracy of modelled AbAg inte…☆32Oct 5, 2025Updated 6 months ago
- open source repository☆147Nov 30, 2023Updated 2 years ago
- Unconstrained lattice antibody-antigen bindings generator☆111Nov 16, 2025Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Official repository for DiffPepBuilder and DiffPepDock tools☆124Oct 24, 2025Updated 5 months ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆43Jun 17, 2024Updated last year
- ☆214Sep 24, 2024Updated last year
- ☆23Nov 28, 2025Updated 4 months ago
- ☆96Oct 14, 2025Updated 6 months ago
- Design data and process for the AdaptyvBio protein design competition☆11Dec 11, 2024Updated last year
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆30Oct 6, 2022Updated 3 years ago
- ☆41Jul 28, 2025Updated 8 months ago
- ☆77Oct 23, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Protein Design with Guided Discrete Diffusion☆141Feb 21, 2024Updated 2 years ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆99Jul 29, 2024Updated last year
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆121Oct 30, 2025Updated 5 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 5 months ago
- Antibody-specific masked language model☆72Mar 5, 2026Updated last month
- Efficient evolution from protein language models☆222Aug 26, 2023Updated 2 years ago