This is a modified version of EDTA
☆15Jul 20, 2026Updated this week
Alternatives and similar repositories for EDTA_update
Users that are interested in EDTA_update are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Detailed bioinformatics scripts and methods used in the Maize-Pan-genome paper.☆16Oct 8, 2025Updated 9 months ago
- a gap-filling tools of genome in complex region.☆26Dec 30, 2025Updated 6 months ago
- ☆24May 31, 2024Updated 2 years ago
- A Comparative Genomics Framework Integrating Synteny Visualization☆18May 6, 2026Updated 2 months ago
- ☆26Jun 27, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆28May 12, 2026Updated 2 months ago
- ☆24Feb 26, 2026Updated 4 months ago
- PhaseGrass, a reference-based phasing workflow generating chromosome-level haplotype-resolved diploid assembly for highly heterozygous ge…☆17Jun 2, 2026Updated last month
- ☆17Nov 26, 2023Updated 2 years ago
- This repository contains all codes and scripts used in the Wild Rice Pangenome Project. The project aims to provide a comprehensive analy…☆30Apr 17, 2025Updated last year
- zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.☆17Updated this week
- MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis☆17Nov 7, 2024Updated last year
- BRAKER re-implemented with snakemake☆74Jul 8, 2026Updated last week
- A gap-closing software tool that uses long reads to enhance genome assembly.☆24Apr 25, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆73Oct 23, 2025Updated 8 months ago
- Structure variants calling and genotyping scripts for pan-Zea☆22Nov 17, 2022Updated 3 years ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Nov 2, 2024Updated last year
- ☆31Apr 16, 2023Updated 3 years ago
- GenomeThreader gene prediction software.☆14Nov 10, 2025Updated 8 months ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆62May 17, 2026Updated 2 months ago
- ☆10Jun 13, 2020Updated 6 years ago
- Personal diploid genome creation and coordinate conversion☆31Apr 1, 2025Updated last year
- ☆18Feb 10, 2026Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Generate alternative long reads with the help of target`s assemblies, target`s PacBio HiFi reads and reference genome.☆20Mar 25, 2026Updated 3 months ago
- ☆30Mar 4, 2022Updated 4 years ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆40Oct 29, 2025Updated 8 months ago
- Modular Genome Assembly, Annotation and Assessment Pipeline☆21Mar 16, 2026Updated 4 months ago
- Plant genome assembly and annotation pipeline using snakemake☆55May 14, 2025Updated last year
- ☆17Mar 2, 2024Updated 2 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Jun 6, 2019Updated 7 years ago
- Here, we report telomere-to-telomere (T2T) gap-free genomes for domesticated pepper Capsicum annuum and wild relative Capsicum rhomboideu…☆13Feb 18, 2024Updated 2 years ago
- 一些关于基因组及转录组的知识☆48Dec 29, 2025Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An Example of Subgenome Phasing for Complex Allopolyploidy☆17Nov 6, 2025Updated 8 months ago
- Visualing species tree from ASTRAL with gene tree discordance