Some record about genomes and transcriptomes
☆50Dec 29, 2025Updated 10 months ago
Alternatives and similar repositories for Genome-analysis
Users that are interested in Genome-analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆40Aug 8, 2025Updated last year
- Some script and skills in Population Genetic analyzes☆26Jul 6, 2024Updated 2 years ago
- Fast implementation of HMMSEARCH optimized for high-memory systems using PyHMMER☆12Jan 13, 2026Updated 9 months ago
- Inferring natural selection by comparative population genomic analysis across species☆28Oct 31, 2023Updated 2 years ago
- Some scripts for visualization☆22Aug 6, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- a precise pangenome browser combining linear and graph-based pan-genome☆13Jul 16, 2024Updated 2 years ago
- The cattle Genotype-Tissue Expression atlas v1☆33Mar 14, 2023Updated 3 years ago
- An R package for comparative transcriptomic analyses of hybrids and their progenitors☆18Sep 5, 2024Updated 2 years ago
- 整理常用的群体遗传学分析流程和脚本☆122Jan 16, 2026Updated 9 months ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆24Jun 14, 2024Updated 2 years ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆13Sep 3, 2024Updated 2 years ago
- Best practices and workflow for genome annotation☆80Apr 14, 2025Updated last year
- An R package for plotting GWAS results from the GAPIT package☆14Oct 20, 2026Updated last week
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Repository☆10Oct 23, 2024Updated 2 years ago
- Annotation Extraction Genomic Integration Suite (AEGIS) is a powerful and flexible Python-based suite for the manipulation, analysis, and…☆15Updated this week
- A Tool for low Coverage HiFi Data Assembly☆44Dec 27, 2025Updated 10 months ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 9 months ago
- Accurate haplotype construction and detection of selection signatures enabled by 889 high quality pig genome sequences☆14May 11, 2023Updated 3 years ago
- A software suite for accurate identification, annotation, translation, and feature characterization of annotate transcripts.☆24Sep 1, 2021Updated 5 years ago
- Versatile tool for detecting selective sweeps with a variety of ages, strengths, starting allele frequencies, and completeness.☆15Feb 16, 2026Updated 8 months ago
- Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.☆26Feb 23, 2022Updated 4 years ago
- crussmap is a faster tool to convert genome coordinates between difference reference assemblies.☆23May 4, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- 生物信息学入门的系列课程,包括Linux, shell, Python 编程,建库测序,基因组学,以及系统进化,常用软件使用等内容。☆24Sep 16, 2021Updated 5 years ago
- a Semi-automated pipeline for assembling T2T genome☆30Oct 16, 2025Updated last year
- A novel genome assembly pipeline based on deep learning☆71Dec 2, 2024Updated last year
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit☆12Jan 17, 2020Updated 6 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆45Mar 4, 2024Updated 2 years ago
- pipeline for working with PacBio long read RNA data using the outputs of isoseq3☆10Sep 1, 2026Updated last month
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- A new simple and efficient software to PCA and Cluster For popolation VCF File☆84Aug 1, 2026Updated 2 months ago
- zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.☆29Oct 19, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆18Aug 14, 2024Updated 2 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- Cool Bioinformatics Scripts☆12May 21, 2024Updated 2 years ago
- This is a method to find telomeres and centromeres in plants.☆43Jun 17, 2023Updated 3 years ago
- Pipeline for eukaryotic genome annotation based on external evidences☆15Feb 23, 2023Updated 3 years ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆32Apr 2, 2026Updated 6 months ago
- Strand and WGD aware syntenic gene identification☆16Oct 16, 2025Updated last year