一些关于基因组及转录组的知识
☆48Dec 29, 2025Updated 6 months ago
Alternatives and similar repositories for Genome-analysis
Users that are interested in Genome-analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An R package for comparative transcriptomic analyses of hybrids and their progenitors☆17Sep 5, 2024Updated last year
- 群体遗传学分析中用到的script和skill等☆26Jul 6, 2024Updated 2 years ago
- Inferring natural selection by comparative population genomic analysis across species☆27Oct 31, 2023Updated 2 years ago
- a precise pangenome browser combining linear and graph-based pan-genome☆13Jul 16, 2024Updated 2 years ago
- The cattle Genotype-Tissue Expression atlas v1☆29Mar 14, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 一些用于画图的R脚本☆22Jan 8, 2026Updated 6 months ago
- A Tool for low Coverage HiFi Data Assembly☆43Dec 27, 2025Updated 6 months ago
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated 11 months ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.☆26Feb 23, 2022Updated 4 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆43Mar 4, 2024Updated 2 years ago
- Repository☆10Oct 23, 2024Updated last year
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit☆11Jan 17, 2020Updated 6 years ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Versatile tool for detecting selective sweeps with a variety of ages, strengths, starting allele frequencies, and completeness.☆15Feb 16, 2026Updated 5 months ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 6 months ago
- ☆17Mar 7, 2025Updated last year
- crussmap is a faster tool to convert genome coordinates between difference reference assemblies.☆24May 4, 2023Updated 3 years ago
- 生物信息学入门的系列课程，包括Linux, shell, Python 编程，建库测序，基因组学，以及系统进化，常用软件使用等内容。☆23Sep 16, 2021Updated 4 years ago
- This is a method to find telomeres and centromeres in plants.☆43Jun 17, 2023Updated 3 years ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆24Jun 14, 2024Updated 2 years ago
- A new simple and efficient software to PCA and Cluster For popolation VCF File☆83Jun 25, 2025Updated last year
- Genome-wide scan for balancing selection using beta statistic☆32Apr 26, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- This is a modified version of EDTA☆15Updated this week
- Best practices and workflow for genome annotation☆78Apr 14, 2025Updated last year
- 整理常用的群体遗传学分析流程和脚本☆121Jan 16, 2026Updated 6 months ago
- ☆30Mar 4, 2022Updated 4 years ago
- Pipeline for eukaryotic genome annotation based on external evidences☆15Feb 23, 2023Updated 3 years ago
- ☆16Jul 25, 2021Updated 4 years ago
- Some components that speed up and reduce resource cost for original ALLHiC☆15Jun 21, 2025Updated last year
- Consensus genome annotation using OMA☆32Jan 14, 2026Updated 6 months ago
- Everything but the kitchen sink☆13Feb 6, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆14Oct 1, 2021Updated 4 years ago
- A novel genome assembly pipeline based on deep learning☆71Dec 2, 2024Updated last year
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- Strand and WGD aware syntenic gene identification☆16Oct 16, 2025Updated 9 months ago
- ☆14Apr 14, 2026Updated 3 months ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆62May 17, 2026Updated 2 months ago