Crazzy-Rabbit / Genome-analysisLinks
一些关于基因组及转录组的知识
☆35Updated last year
Alternatives and similar repositories for Genome-analysis
Users that are interested in Genome-analysis are comparing it to the libraries listed below
Sorting:
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆29Updated last year
- Genome annotation pipeline☆64Updated last year
- ☆40Updated 4 months ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- An Integrative Toolkit for Assembling Plant Mitochondrial Genomes Using HiFi Reads☆16Updated last month
- A machine learning-based genotyping tool for structural variation in short reads☆25Updated 2 months ago
- Plant genome assembly and annotation pipeline using snakemake☆48Updated 6 months ago
- a software for annotating plant genes☆22Updated last year
- Scripts that used in our chicken T2T manuscript.☆22Updated 2 years ago
- Genome haplotype assembly and assessment method☆12Updated 2 years ago
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆65Updated last month
- DNA序列比对结果 可视化展示工具☆56Updated 2 years ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆50Updated 3 months ago
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- A novel genome assembly pipeline based on deep learning☆66Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆44Updated last year
- This repository contains all codes and scripts used in the Wild Rice Pangenome Project. The project aims to provide a comprehensive analy…☆23Updated 7 months ago
- BITACORA: A Bioinformatics tool for gene family annotation☆49Updated 6 months ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆42Updated 2 months ago
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆35Updated this week
- ☆20Updated last year
- BAsh-Based Automated Parallel Positive selection Analysis☆16Updated 2 months ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆43Updated 2 weeks ago
- ☆42Updated last year
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- An efficient assembly tool for plant mitochondrial genome☆65Updated last year
- a Semi-automated pipeline for assembling T2T genome☆24Updated last month
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 4 years ago
- ☆41Updated 2 years ago