friedpine / scRNASeq_ESCC
The code for processing single cell RNA-Seq dataset from ESCC cohorts
☆10Updated 3 years ago
Alternatives and similar repositories for scRNASeq_ESCC:
Users that are interested in scRNASeq_ESCC are comparing it to the libraries listed below
- Spatial transcriptomics of heart tissue☆20Updated 2 years ago
- R code used to analyze single cell PDAC data☆34Updated 9 months ago
- ☆20Updated last year
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 2 years ago
- ☆19Updated last year
- ☆25Updated 10 months ago
- ☆17Updated last year
- ☆16Updated last year
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Updated 2 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated last year
- ☆28Updated last month
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆30Updated 2 years ago
- ☆15Updated last year
- NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…☆11Updated 11 months ago
- Code repository site for manuscript: Unraveling the Heterogeneity of Tumor-Infiltrating Myeloid Cells in Immune Checkpoint Blockade: A Si…☆11Updated last year
- ☆14Updated last year
- ☆17Updated 4 years ago
- ☆15Updated 2 years ago
- These are code and scripts for MVI+ HCC scRNA-seq analysis.☆15Updated last year
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 4 years ago
- ☆29Updated last year
- ☆40Updated 7 months ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆21Updated 2 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated last year
- Calculating Tumor microenvironment score☆28Updated 2 years ago
- Construct Tumor Transition Zone Microenvironment☆42Updated 4 months ago
- Visualize the results of cell-cell communication analysis☆20Updated 2 years ago
- ☆14Updated last year
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- ☆12Updated 3 years ago