friedpine / scRNASeq_ESCC
The code for processing single cell RNA-Seq dataset from ESCC cohorts
☆9Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for scRNASeq_ESCC
- Spatial transcriptomics of heart tissue☆17Updated 2 years ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆26Updated 2 years ago
- R code used to analyze single cell PDAC data☆30Updated 4 months ago
- ☆16Updated 8 months ago
- ☆18Updated 5 months ago
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 4 years ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 2 years ago
- ☆14Updated last year
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆9Updated last year
- ☆17Updated 10 months ago
- ☆17Updated last year
- ☆17Updated 3 years ago
- ☆19Updated 7 months ago
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated 10 months ago
- ☆12Updated 2 years ago
- ☆22Updated last year
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated last year
- These are code and scripts for MVI+ HCC scRNA-seq analysis.☆13Updated last year
- ☆13Updated last year
- ☆11Updated last year
- ☆42Updated 2 years ago
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆25Updated 2 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆20Updated 2 weeks ago
- Construct Tumor Transition Zone Microenvironment☆35Updated this week
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆18Updated 2 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆35Updated 5 months ago
- Code repository site for manuscript: Unraveling the Heterogeneity of Tumor-Infiltrating Myeloid Cells in Immune Checkpoint Blockade: A Si…☆10Updated last year
- code and dataset for spatialDWLS☆12Updated 3 years ago
- ☆31Updated 8 months ago
- ☆14Updated last year