Alternatives and similar repositories for stromal_subclasses

Users that are interested in stromal_subclasses are comparing it to the libraries listed below

• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆27Updated 3 years ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆30Updated 2 years ago
• AndersonHu85 / ccRCC_multiomics
  ☆17Updated 2 years ago
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆31Updated 3 years ago
• smorabit / hdWGCNA_paper
  Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
  ☆17Updated 2 years ago
• guangchunhan / LUAD_Code
  ☆24Updated 2 years ago
• tiroshlab / Spatial_Glioma
  Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper
  ☆52Updated 10 months ago
• lfranzen / spatial-lung-fibrosis
  Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…
  ☆29Updated last year
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆32Updated 4 years ago
• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆23Updated last year
• Teichlab / SKM_ageing_atlas
  ☆12Updated last year
• veltenlab / CloneTracer
  This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…
  ☆26Updated last year
• youqiongye / CRC_scRNAseq
  ☆47Updated 3 years ago
• teresho4 / scRNA-seq_atlas_Hs_PBMC_aging
  ☆17Updated 2 years ago
• christophhmayr / 2023_Mayr
  Code for the spatial transcriptomic paper on IPF lungs
  ☆20Updated last year
• LuChenLab / inferCC
  Lung cancer 10X analysis
  ☆11Updated 4 years ago
• SGDDNB / GeneSwitches
  Ordering gene-expression and functional events in single-cell experiments
  ☆25Updated last year
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆48Updated 7 months ago
• bioinfo-biols / SEVtras
  sEV-containing droplet identification in scRNA-seq data (SEVtras)
  ☆26Updated 9 months ago
• mbourgey / scRNA_GBM
  analysis script for GBM single cell RNA seq data
  ☆22Updated 4 years ago
• ChanLab-UTSW / BreastCancer_Integrated
  ☆32Updated 8 months ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆34Updated last week
• liziyie / Onco-fetal-CAF-in-HCC
  ☆22Updated 2 years ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 3 years ago
• horsedayday / eQTLsingle
  ☆15Updated 2 years ago
• immunogenomics / sceQTL
  Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)
  ☆20Updated 2 years ago
• yunshun / HumanBreast10X
  ☆26Updated 3 years ago
• single-cell-BGI / NHPCA
  ☆18Updated 4 years ago
• aliceygao / pan-Fibroblast
  ☆52Updated last year
• karthikj89 / scgenetics
  identifying disease critical cell types and programs from single cell RNAseq
  ☆57Updated 3 years ago