Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/personal/dalia_barkley_nyulangone_org/EuHetdAOc2pLjm9XUwqdWicBnlXIbyvHx-EOC-inP-SGUg?e=rxa7Ry
☆31Aug 17, 2022Updated 3 years ago
Alternatives and similar repositories for PanCancer
Users that are interested in PanCancer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆63Dec 27, 2023Updated 2 years ago
- ☆51Feb 16, 2022Updated 4 years ago
- Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".☆129Sep 24, 2024Updated last year
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆133Sep 6, 2024Updated last year
- ☆21Dec 23, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- scRNA-seq analysis of EENT-ONB☆22Jan 14, 2024Updated 2 years ago
- ☆28Jan 15, 2024Updated 2 years ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆81Oct 29, 2024Updated last year
- ☆15Oct 10, 2023Updated 2 years ago
- R code used to analyze single cell PDAC data☆43Jun 29, 2024Updated last year
- ☆22Mar 6, 2023Updated 3 years ago
- ☆17Sep 13, 2023Updated 2 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆57Jan 6, 2025Updated last year
- Integration of gut cell atlases☆35Oct 29, 2025Updated 5 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Repository for codes for the HBCA paper☆42Mar 17, 2023Updated 3 years ago
- ☆57Aug 8, 2024Updated last year
- Scanner of specific spatial patterns in tissues☆14Jul 15, 2022Updated 3 years ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Oct 6, 2021Updated 4 years ago
- ☆58Feb 23, 2024Updated 2 years ago
- ☆129Mar 27, 2022Updated 4 years ago
- These are scripts for pan-cacner B cells analyses.☆57Jul 22, 2024Updated last year
- Accurate and fast cell marker gene identification with COSG☆64Feb 8, 2026Updated 2 months ago
- ☆37Sep 20, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆17Nov 5, 2024Updated last year
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆65Dec 7, 2022Updated 3 years ago
- ☆32Jan 3, 2025Updated last year
- ☆12Jun 11, 2023Updated 2 years ago
- ☆25Aug 24, 2023Updated 2 years ago
- The code for processing single cell RNA-Seq dataset from ESCC cohorts☆12May 13, 2021Updated 4 years ago
- IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology. https://iobr.github.…☆284Updated this week
- A package for the analysis of Imaging Mass Cytometry data☆15Mar 25, 2026Updated 2 weeks ago
- Spatial transcriptomics of heart tissue☆28Jun 16, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code related to Shiao, Gouin III, Ing, et al, Cancer Cell 2023.☆14Oct 27, 2023Updated 2 years ago
- ☆13Jun 18, 2018Updated 7 years ago
- ☆11May 24, 2024Updated last year
- Code generated by Evelyn Fitzsimons (Regmefi)☆11Aug 30, 2024Updated last year
- A computational method for comparing cellular profiles with the flexibility to place a higher weight on functional features of interest.☆12Jan 31, 2023Updated 3 years ago
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Mar 4, 2025Updated last year
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆13Dec 27, 2023Updated 2 years ago