yanailab / PanCancer
Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/personal/dalia_barkley_nyulangone_org/EuHetdAOc2pLjm9XUwqdWicBnlXIbyvHx-EOC-inP-SGUg?e=rxa7Ry
☆30Updated 2 years ago
Alternatives and similar repositories for PanCancer:
Users that are interested in PanCancer are comparing it to the libraries listed below
- Spatial transcriptomics of heart tissue☆20Updated 2 years ago
- ☆25Updated 10 months ago
- ☆20Updated last year
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 2 years ago
- ☆22Updated 2 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆25Updated last month
- ☆28Updated last month
- ☆37Updated 2 years ago
- R code used to analyze single cell PDAC data☆34Updated 9 months ago
- ☆17Updated last year
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Updated last month
- Integration of gut cell atlases☆23Updated 2 months ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆19Updated last year
- ☆15Updated last year
- Code for the spatial transcriptomic paper on IPF lungs☆14Updated 8 months ago
- Construct Tumor Transition Zone Microenvironment☆42Updated 4 months ago
- ☆20Updated last year
- ☆12Updated last year
- ☆17Updated last year
- Hierarchical Cell Annotation☆20Updated 4 months ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆13Updated 3 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆9Updated 6 months ago
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆22Updated last year
- ☆15Updated 2 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆16Updated last year
- Single Cell Analysis Operations☆13Updated last month
- ☆12Updated 5 months ago
- ☆45Updated last year
- ☆15Updated last year