Alternatives and similar repositories for Wilson_Muto_NComm_2022

Users that are interested in Wilson_Muto_NComm_2022 are comparing it to the libraries listed below

• jlaffy / infercna
  Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data
  ☆43Updated last year
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆37Updated 4 years ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆76Updated 2 months ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆48Updated 5 months ago
• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆65Updated 11 months ago
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆37Updated 6 years ago
• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆68Updated last month
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆28Updated 2 years ago
• harbourlab / uphyloplot2
  Draw phylogenetic trees of tumor evolution
  ☆86Updated 2 years ago
• GfellerLab / SuperCell
  Coarse-graining of large single-cell RNA-seq data into metacells
  ☆89Updated 3 months ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆32Updated 4 years ago
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆33Updated 4 years ago
• Coolgenome / iTALK
  ☆62Updated 6 years ago
• xmc811 / Scillus
  R Package for Single-Cell Dataset Processing and Visualization
  ☆64Updated 4 years ago
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆47Updated last year
• spcdot / CopyscAT
  Inferring CNV data from single cell ATAC seq
  ☆24Updated 3 months ago
• Japrin / STARTRAC
  STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
  ☆109Updated 5 months ago
• GreenleafLab / 10x-scATAC-2019
  Publication Page for Satpathy*, Granja* et al 2019
  ☆95Updated 5 years ago
• campbio / decontX
  Methods for decontamination of single cell data
  ☆47Updated 7 months ago
• califano-lab / single-cell-pipeline
  ☆50Updated 5 years ago
• califano-lab / PISCES
  R package for Protein activity analysis of single-cell RNAseq.
  ☆83Updated 2 years ago
• cssmillie / ulcerative_colitis
  ☆63Updated 5 years ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆33Updated 10 months ago
• KChen-lab / METAFlux
  ☆73Updated last year
• bischofp / single_cell_lung_adenocarcinoma
  ☆33Updated 3 years ago
• prabhakarlab / RCAv2
  R package for robust clustering of single cell RNA sequencing data
  ☆35Updated last year
• EDePasquale / DoubletDecon
  A tool for removing doublets from single-cell RNA-seq data
  ☆75Updated 4 years ago
• supatt-lab / SingCellaR
  an integrative analysis tool for analysing large-scale single cell RNA-sequencing data
  ☆35Updated 2 years ago
• smorabit / hdWGCNA_paper
  Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
  ☆16Updated 2 years ago
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆38Updated 2 years ago