MikeAxtell / CleaveLand4Links
CleaveLand4: Analysis of degradome data to find sliced miRNA and siRNA targets
☆21Updated 4 years ago
Alternatives and similar repositories for CleaveLand4
Users that are interested in CleaveLand4 are comparing it to the libraries listed below
Sorting:
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆67Updated last year
- FEELnc : FlExible Extraction of LncRNA☆92Updated 4 months ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- web documentation for Trinotate☆48Updated 2 years ago
- Repository of common bioinformatics scripts☆39Updated 4 years ago
- A versatile aligning pipeline for bisulfite sequencing data☆66Updated 7 years ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆29Updated 6 years ago
- RiboDiff: Tool to detect changes in translational efficiency based on ribosome footprinting data☆24Updated 9 years ago
- ☆89Updated 5 years ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 7 years ago
- Allele-specific alignment sorting☆61Updated 2 years ago
- A Nextflow-based pipeline for comprehensive analyses of long non-coding RNAs from RNA-seq datasets☆84Updated 3 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 9 years ago
- Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs☆53Updated 4 months ago
- fork of RSeQC python RNAseq metrics suit of tools☆49Updated 6 years ago
- parallelized blat with multi-threads support☆53Updated 10 months ago
- Genome Scripts used in fungal comparative genomics☆66Updated 5 years ago
- Simple code snippets and data for the One Flowcell - One Assembly study☆35Updated 7 years ago
- Variant Calling Pipeline Using GATK4 and Nextflow☆58Updated 2 years ago
- Updated and optimized fork of BSMAP☆23Updated 4 years ago
- ☆60Updated 5 months ago
- piRNA pipeline collection developed in the Zamore Lab and ZLab in UMass Med School☆61Updated 5 months ago
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆29Updated 6 years ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆91Updated this week
- A pipeline for analyzing DNA methylation data from bisulfite sequencing.☆71Updated 3 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 7 months ago
- BS-seq analysis pipeline☆45Updated 2 years ago
- A shiny app for TBtools data plot☆29Updated 9 years ago
- QTL-seq pipeline to identify causative mutations responsible for a phenotype☆58Updated 10 months ago
- Coding-Non-Coding Index (CNCI)☆41Updated 7 years ago