CleaveLand4: Analysis of degradome data to find sliced miRNA and siRNA targets
☆21Mar 28, 2021Updated 5 years ago
Alternatives and similar repositories for CleaveLand4
Users that are interested in CleaveLand4 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Oct 7, 2024Updated 2 years ago
- official repository for the UEA sRNA Workbench☆10May 31, 2023Updated 3 years ago
- Applied Statistics for High-Throughput Biology☆16Jul 16, 2026Updated 3 months ago
- web documentation for Trinotate☆48Jan 23, 2023Updated 3 years ago
- Ribo-seq data analysis tool☆10Sep 10, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Nanopanel2: a somatic variant caller for Nanopore panel sequencing data☆11Sep 21, 2021Updated 5 years ago
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Apr 29, 2021Updated 5 years ago
- Identification of differentially methylated regions between multiple epigenomes from BS-treated read mappings via methylated region calli…☆13Sep 1, 2023Updated 3 years ago
- GOMAP-Singularity is the containerized version of GOMAP☆11Jul 16, 2023Updated 3 years ago
- Plant small RNA target prediction tool☆28Dec 19, 2016Updated 9 years ago
- [G]enomic [P]ositioning with [Py]thon☆15Jun 19, 2026Updated 4 months ago
- Peak calling for 4C data☆13May 4, 2018Updated 8 years ago
- Suite for phased clusters discovery, comparison, annotation and to identify miRNA triggers - uses MapReduce model [In review]☆10Oct 9, 2021Updated 5 years ago
- microRNA PREdiction From small RNA-seq data☆32Dec 28, 2017Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- comparative genome dot plot viewer☆10May 19, 2019Updated 7 years ago
- ☆13Jan 18, 2023Updated 3 years ago
- RNA smFISH oligos/probes design tool☆14Oct 14, 2026Updated 3 weeks ago
- Pipeline to phase a genome into two homeologous subgenomes. Parental genomes are required.☆10May 22, 2025Updated last year
- Lots of plots, various labeling, axis and color scaling functions.☆13Jul 15, 2026Updated 3 months ago
- A repo contains historical and updated MTEC libraries.☆19Aug 28, 2026Updated 2 months ago
- Simple and quick FastQ and FastA tool for file reading and conversion☆17Jul 11, 2014Updated 12 years ago
- Pipeline for lncRNA, Circular RNA, and novel mRNA identification.☆11May 5, 2023Updated 3 years ago
- Demographic analysis of Brassica oleracea☆10May 19, 2026Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- PhyloSD: Phylogenomic Subgenome Detection pipeline☆11Jun 24, 2022Updated 4 years ago
- Repository to automatically process Fluorescence In Situ Hybridization (FISH) images using Cellpose and BIG-FISH (FISH-quant v2).☆19Dec 16, 2024Updated last year
- R labs accompanying the OpenIntro Biostatistics textbook☆42Feb 14, 2022Updated 4 years ago
- Tutorials in datamining and bioinformatics☆12Jan 18, 2024Updated 2 years ago
- GFF3 format with miRNA and isomiR information from sequencing data☆17Aug 5, 2019Updated 7 years ago
- ☆10Mar 18, 2025Updated last year
- Multiomics Deep Archetypal Analysis☆11Feb 25, 2025Updated last year
- Glittery data analysis and multi-variate analysis for all kinds of beautiful, big and small data sets. But remember - rubbish in = rubbis…☆24Sep 22, 2020Updated 6 years ago
- Mapping pipeline for data generated using Arima-HiC☆85May 22, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Nov 28, 2018Updated 7 years ago
- Data Science Toolkit☆10Feb 19, 2017Updated 9 years ago
- Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)☆12May 22, 2025Updated last year
- Course materials for Math 241 at Reed College.☆11May 11, 2018Updated 8 years ago
- ☆10Sep 14, 2023Updated 3 years ago
- Analyses for Manuscript "Sensitive detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes"☆13Aug 4, 2020Updated 6 years ago
- R package for CRAG☆12Feb 17, 2025Updated last year