Alternatives and similar repositories for OpenMS-Tutorials

Users that are interested in OpenMS-Tutorials are comparing it to the libraries listed below

• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• statisticalbiotechnology / diffacto
  ☆13Updated last year
• kentsislab / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆27Updated 7 years ago
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated 9 months ago
• fjossinet / RNA-Science-Toolbox
  A platform to do RNA science
  ☆27Updated 4 years ago
• markmipt / ms1searchpy
  ☆12Updated 2 weeks ago
• CompOmics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆47Updated 7 months ago
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆24Updated 4 years ago
• CompOmics / IM2Deep
  Collisional cross-section prediction for modified and multiconformational peptides
  ☆13Updated 2 months ago
• USTC-HIlab / DeepPhos
  ☆17Updated 6 years ago
• pFindStudio / pGlyco3
  ☆20Updated 8 months ago
• nh2tran / DeepNovo-DIA
  De novo peptide sequencing for DDA and DIA by deep learning
  ☆37Updated 4 years ago
• CompOmics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆70Updated 3 weeks ago
• Nesvilab / msconvert-scripts
  Some shell scripts related to Thermo Fisher raw format conversion using msconvert
  ☆11Updated 11 months ago
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆45Updated 3 years ago
• optimusmoose / jsms
  A modular JavaScript viewer for mass spectrometry data
  ☆12Updated 3 years ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆35Updated 4 months ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆48Updated 7 months ago
• brineylab / abstar
  VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
  ☆43Updated 2 months ago
• CompOmics / peptide-shaker
  Interpretation of proteomics identification results
  ☆52Updated 2 months ago
• verilylifesciences / deepmass
  DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.
  ☆51Updated 3 years ago
• msproteomicstools / msproteomicstools
  Some hopefully useful tools for mass spectrometry applied to proteomics
  ☆53Updated 4 years ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆42Updated last year
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆49Updated last week
• Roestlab / massdash
  MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization
  ☆21Updated 2 weeks ago
• Roestlab / PythonProteomics
  A collection of available Python tools for Proteomics analysis
  ☆61Updated 6 years ago
• levitsky / identipy
  ☆10Updated 2 months ago
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆74Updated 2 years ago
• denisbeslic / denovopipeline
  Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.
  ☆42Updated last year