JamesGallant / ProVisionLinks
Shiny app for proteomics data analysis
☆14Updated 4 years ago
Alternatives and similar repositories for ProVision
Users that are interested in ProVision are comparing it to the libraries listed below
Sorting:
- Chemical Similarity Enrichment analysis of metabolomics datasets☆30Updated last year
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Updated 4 years ago
- Kinase-Substrate Enrichment Analysis (KSEA) App☆10Updated 8 years ago
- R-Shiny GUI integrated with the MSstats package family☆18Updated this week
- ☆29Updated 3 years ago
- Create .mzML files through the R Console☆12Updated 3 months ago
- ☆18Updated 6 years ago
- A tool integrates channel abundances from multiple TMT samples and exports a general report for downstream analysis.☆13Updated last year
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.☆16Updated 3 months ago
- Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure☆13Updated 5 months ago
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆12Updated 8 months ago
- R package for MetFrag☆24Updated 8 years ago
- MetNormalizer is used to normalize large scale metabolomics data.☆22Updated 4 years ago
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Updated 6 months ago
- R package for optimized LC-MS spectra processing☆26Updated last week
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 3 years ago
- The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…☆48Updated last month
- Core Utils for Mass Spectrometry Data☆17Updated 2 weeks ago
- Metabolome Annotation Workflow☆26Updated last month
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28Updated 2 years ago
- A collection of common mz values found in mass spectrometry.☆20Updated last year
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Updated 6 years ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆16Updated 8 years ago
- Assigning precursor-product ion relationships in indiscriminant MS/MS data☆13Updated last month
- TimsR: Easy access to timsTOF Pro data from R.☆12Updated 4 years ago
- Rocker image for metabolomics data analysis☆13Updated last month
- pathway and network analysis for metabolomics☆43Updated this week
- ☆18Updated last week
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10Updated 8 years ago