hwanglab / divineLinks
Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data
☆13Updated 6 years ago
Alternatives and similar repositories for divine
Users that are interested in divine are comparing it to the libraries listed below
Sorting:
- Structural Variation breakpoint discovery via adaptive learning☆16Updated 2 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 5 years ago
- Pan gGnome Viewer☆10Updated 3 months ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Updated 4 years ago
- ☆13Updated 8 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 2 weeks ago
- ☆11Updated 2 years ago
- ☆13Updated 3 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 6 years ago
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆12Updated 6 years ago
- Unfazed by genomic variant phasing☆27Updated last year
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Updated 9 years ago
- Reducing reference bias using multiple population reference genomes☆34Updated last year
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Updated 6 years ago
- CLI to automate Nextflow pipeline testing☆12Updated this week
- ☆12Updated 4 years ago
- Generate an enhanced VCF files from ClinVar XML Full releases☆15Updated 2 years ago
- add true-negative SVs from a population callset to a truth-set.☆15Updated 3 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Updated 3 years ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Updated 6 years ago
- VCF files of SVs using long-read sequencing (LRS).☆22Updated 3 years ago
- Detects human contamination in bam files☆16Updated 5 years ago
- VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number va…☆22Updated 5 years ago
- Rapid and accurate ancestry inference using SNVs.☆26Updated 2 months ago
- Recommended Graphtyper pipelines☆15Updated 4 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 7 months ago
- Haplotype-based somatic genome simulator☆10Updated 8 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- sort genomic data☆36Updated 5 years ago