DataBiosphere / data-explorer
☆11Updated 2 years ago
Alternatives and similar repositories for data-explorer:
Users that are interested in data-explorer are comparing it to the libraries listed below
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- ☆11Updated last week
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Updated 6 years ago
- Open Targets Genetics UI☆14Updated 3 months ago
- Exercises for training scientists to perform some RNA-seq analyses.☆11Updated 5 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆15Updated 2 years ago
- A web app for exploratory data analysis of high-throughput screens (HTS)☆17Updated 6 years ago
- A web application from the Raphael Lab for mutation annotation and genome interpretation.☆20Updated 7 years ago
- ☆12Updated 6 years ago
- Tools for munging genomic data☆21Updated 5 years ago
- Variant Effect Prediction for Python☆15Updated 8 years ago
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11Updated 8 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆17Updated last year
- Creating virtual environments for R.☆17Updated 5 years ago
- Class materials for the NIH HPC snakemake class☆16Updated 7 months ago
- A server for maintaining high-throughput sequencing QC data☆13Updated last year
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Updated 6 years ago
- ☆28Updated 6 years ago
- Render HTML reports from parametrized jupyter notebooks or Rmarkdown documents.☆9Updated 6 months ago
- Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments☆13Updated 8 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Updated 3 years ago
- Docker containers that demonstrate a proof of concept bwa alignment workflow☆14Updated 10 years ago
- Genomic Visualization Catalog☆13Updated 2 years ago
- Railroadtracks is a Python package to handle connected computation steps for DNA and RNA Seq.☆14Updated 9 years ago
- Discoverability for gene search☆12Updated 2 years ago
- WDL plugin for pytest☆48Updated last year
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Updated 9 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Updated 6 years ago