IHC-image analysis workflow
☆24May 29, 2018Updated 8 years ago
Alternatives and similar repositories for IHCount
Users that are interested in IHCount are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- scripts for analyzing data of macrophage development in human☆10Dec 8, 2019Updated 6 years ago
- Trained models for use with QuPath☆16Jun 25, 2026Updated 2 months ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Oct 26, 2018Updated 7 years ago
- Rule-Based Thyroid Whole Slide Image Diagnosis☆10Aug 12, 2020Updated 6 years ago
- ☆42Oct 12, 2018Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆33Dec 2, 2021Updated 4 years ago
- Plugin for the quantitative analysis of immunohistochemistry samples☆12Jul 29, 2017Updated 9 years ago
- MERFISHTools implement a Bayesian framework for accurately predicting gene or transcript expression from MERFISH data. On top, they provi…☆14Aug 9, 2019Updated 7 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Sep 13, 2023Updated 2 years ago
- Paper discribing LDpred2☆16Oct 20, 2022Updated 3 years ago
- ☆10Mar 14, 2022Updated 4 years ago
- Python function for TMB snake plots☆16Feb 12, 2026Updated 6 months ago
- Python code to read/write .annotation files from Halo☆10Feb 19, 2025Updated last year
- LORIS: A LOgistic Regression-based Immunotherapy-response Score☆16Nov 18, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Image reconstruction from human brain activity by VAE and adversarial learning☆12May 21, 2022Updated 4 years ago
- some demo to show how to write imagepy plugin☆12Jun 25, 2020Updated 6 years ago
- Open source whole slide image preparation and viewing pipeline☆13Mar 16, 2020Updated 6 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆22Jun 22, 2026Updated 2 months ago
- General-purpose optimal control, trajectory optimisation and parameter optimisation using direct collocation☆10Aug 29, 2023Updated 3 years ago
- Preprocessing methylation pipeline, written in python. Easy to use and highly parallelized.☆36Feb 11, 2020Updated 6 years ago
- It will be the supporting scripts for tct project.☆17Oct 10, 2022Updated 3 years ago
- A computational method for inferring the cancer cell fraction of tumour structural variation from whole-genome sequencing data.☆44Aug 21, 2025Updated last year
- 是基础也是综合(一系列对象及函数,需要细致的讲解)☆30Apr 9, 2016Updated 10 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Physics Informed Neural Network (PINN) for a projectile motion.☆14Jul 16, 2020Updated 6 years ago
- Supervision by Fusion: Towards Unsupervised Learning of Deep Salient Object Detector☆11Jun 24, 2023Updated 3 years ago
- We design a method for heritability estimation, namely LD Eigenvalue Regression (LDER), which extends the LDSC method and provides more a…☆13Aug 20, 2025Updated last year
- 📝 [Tutorial] RepSeq data mining basics in R☆11Mar 13, 2019Updated 7 years ago
- Automate Absolute Copy Number Calling using 'ABSOLUTE' package☆41Nov 28, 2023Updated 2 years ago
- Making survival analysis work in TensorFlow☆19Jun 4, 2017Updated 9 years ago
- Predict mutated T-cell epitopes from sequencing data☆30Updated this week
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Jul 13, 2018Updated 8 years ago
- Learning image representations for anomaly detection: application to discovery of histological alterations in drug development☆23Jan 9, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Beyond Universal Saliency: Personalized Saliency Prediction with Multi-task CNN (IJCAI 2017 and TPAMI)☆11Jan 17, 2019Updated 7 years ago
- ☆12Mar 1, 2020Updated 6 years ago
- Code accompanying the paper Neural Image Compression for Gigapixel Histopathology Image Analysis☆49Jun 6, 2023Updated 3 years ago
- Single Cell Epigenome-based Inference of Activity☆19Sep 27, 2023Updated 2 years ago
- ☆11Jul 30, 2022Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆61Aug 11, 2026Updated 2 weeks ago
- Deprecated: please use GillesPy2☆12Oct 15, 2019Updated 6 years ago