A library for QC report based on MultiQC framework
☆32May 7, 2026Updated 2 weeks ago
Alternatives and similar repositories for pmultiqc
Users that are interested in pmultiqc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆26Apr 13, 2026Updated last month
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆75Apr 21, 2026Updated last month
- A reporting pipeline for visualization of immunopeptidomics MS data.☆16Nov 19, 2022Updated 3 years ago
- Python tools for proteogenomics analysis toolkit☆15May 18, 2026Updated last week
- qpx (Quantitative Proteomics eXchange) format (aka quantms.io) a format to capture a full proteomics experiment☆22May 6, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆41May 6, 2024Updated 2 years ago
- Robust statistical inference for quantitative LC-MS proteomics☆33Dec 6, 2022Updated 3 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆24Apr 8, 2026Updated last month
- Proteomics search & quantification so fast that it feels like magic☆289May 8, 2026Updated 2 weeks ago
- Navigation links (and brief descriptions) to my repositories.☆13Nov 25, 2025Updated 6 months ago
- Single cell proteomics data processing☆32Apr 6, 2026Updated last month
- ☆15May 30, 2025Updated 11 months ago
- High quality in silico spectral library generation for data-independent acquisition proteomics☆22Updated this week
- HUPO-PSI mass spectrometry CV☆41Apr 24, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant☆47Apr 23, 2026Updated last month
- This project is created by the Hao Lab at the Department of Chemistry & Biochemistry, University of Maryland, College Park, MD. This proj…☆33Nov 24, 2024Updated last year
- Democratizing ML in proteomics☆53May 6, 2026Updated 2 weeks ago
- Python client for PRIDE Archive Rest API.☆40May 4, 2026Updated 3 weeks ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31May 13, 2026Updated last week
- A Comet-based, best practices proteomics pipeline.☆39Mar 21, 2024Updated 2 years ago
- Absolute quantification package based on quantms.io☆16Sep 25, 2025Updated 8 months ago
- SDRF official validator and converts SDRF to pipeline configuration files☆33May 19, 2026Updated last week
- Realtime quality control for mass spectrometry data acquisition☆22May 19, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆127Apr 19, 2026Updated last month
- ☆17Jul 18, 2022Updated 3 years ago
- DIA-NN - a universal automated software suite for DIA proteomics data analysis.☆443Apr 30, 2026Updated 3 weeks ago
- SDRF: The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆106May 19, 2026Updated last week
- An interactive shiny app for processing DIA-nn output (filtering, MaxLFQ, Top3, iBAQ, etc.)☆15Mar 3, 2026Updated 2 months ago
- R package - MSstats☆97May 15, 2026Updated last week
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆66Apr 11, 2026Updated last month
- HLA-I ligand predictor☆45Mar 19, 2026Updated 2 months ago
- Some shell scripts related to Thermo Fisher raw format conversion using msconvert☆15Feb 10, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Estimation of isoelectric point of peptides and proteins using support vector machines (SVM).☆10Apr 15, 2026Updated last month
- A Deep LEArning-based Mass Spectra Embedder for spectral similarity scoring☆12Jun 18, 2025Updated 11 months ago
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆48Updated this week
- The codebase of the OpenMS project☆593Updated this week
- Collisional cross-section prediction for modified and multiconformational peptides☆13Apr 14, 2026Updated last month
- Recommendations to contenarized your bioinformatics software☆12May 30, 2018Updated 7 years ago
- python scripts for proteogenomics analysis☆10Oct 17, 2019Updated 6 years ago