bigbio / pmultiqcLinks
A library for QC report based on MultiQC framework
☆21Updated this week
Alternatives and similar repositories for pmultiqc
Users that are interested in pmultiqc are comparing it to the libraries listed below
Sorting:
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆57Updated 3 weeks ago
- A Python interface to proteomics data repositories☆35Updated 3 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆36Updated last year
- ☆65Updated last year
- Differential Expression Analysis tool box R lang package for omics data☆45Updated last week
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆81Updated last year
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 5 months ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆38Updated this week
- Absolute quantification package based on quantms.io☆16Updated last week
- ☆35Updated 2 months ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated 7 months ago
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆118Updated 2 weeks ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 7 months ago
- Python client for PRIDE Archive Rest API.☆24Updated 5 months ago
- PDV: an integrative proteomics data viewer☆55Updated 2 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54Updated this week
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆47Updated 2 years ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆96Updated 2 weeks ago
- R package for functionally scoring phosphorylation sites☆21Updated 5 years ago
- ☆24Updated 2 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆23Updated 4 months ago
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆19Updated this week
- A label free quantification tool.☆17Updated 3 months ago
- The repo for LFQ-Analyst☆30Updated last year
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆26Updated 10 months ago
- R package - MSstats☆86Updated last week
- Integration ribosome profiling - mass spectrometry☆15Updated this week
- Spectral library searching using approximate nearest neighbor techniques.☆45Updated 5 months ago
- 🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data☆37Updated last year