A library for QC report based on MultiQC framework
☆30Apr 14, 2026Updated 3 weeks ago
Alternatives and similar repositories for pmultiqc
Users that are interested in pmultiqc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆75Apr 21, 2026Updated 2 weeks ago
- A reporting pipeline for visualization of immunopeptidomics MS data.☆15Nov 19, 2022Updated 3 years ago
- qpx (Quantitative Proteomics eXchange) format (aka quantms.io) a format to capture a full proteomics experiment☆20Apr 28, 2026Updated last week
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆41May 6, 2024Updated 2 years ago
- Robust statistical inference for quantitative LC-MS proteomics☆33Dec 6, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆31Mar 27, 2026Updated last month
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆23Apr 8, 2026Updated 3 weeks ago
- Proteomics search & quantification so fast that it feels like magic☆288Apr 21, 2026Updated 2 weeks ago
- Navigation links (and brief descriptions) to my repositories.☆12Nov 25, 2025Updated 5 months ago
- Single cell proteomics data processing☆32Apr 6, 2026Updated last month
- ☆15May 30, 2025Updated 11 months ago
- High quality in silico spectral library generation for data-independent acquisition proteomics☆21Mar 31, 2026Updated last month
- HUPO-PSI mass spectrometry CV☆41Apr 24, 2026Updated last week
- A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant☆47Apr 23, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Python client for PRIDE Archive Rest API.☆40Updated this week
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31Feb 12, 2026Updated 2 months ago
- A Comet-based, best practices proteomics pipeline.☆39Mar 21, 2024Updated 2 years ago
- An exploration of internal reference scaling (IRS) normalization in isobaric tagging proteomics experiments.☆16Aug 6, 2019Updated 6 years ago
- Absolute quantification package based on quantms.io☆16Sep 25, 2025Updated 7 months ago
- SDRF official validator and converts SDRF to pipeline configuration files☆32Updated this week
- Realtime quality control for mass spectrometry data acquisition☆22Updated this week
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆126Apr 19, 2026Updated 2 weeks ago
- ☆17Jul 18, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- DIA-NN - a universal automated software suite for DIA proteomics data analysis.☆444Updated this week
- SDRF: The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆103Updated this week
- An interactive shiny app for processing DIA-nn output (filtering, MaxLFQ, Top3, iBAQ, etc.)☆15Mar 3, 2026Updated 2 months ago
- R package - MSstats☆97Updated this week
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆64Apr 11, 2026Updated 3 weeks ago
- HLA-I ligand predictor☆45Mar 19, 2026Updated last month
- Some shell scripts related to Thermo Fisher raw format conversion using msconvert☆15Feb 10, 2026Updated 2 months ago
- Estimation of isoelectric point of peptides and proteins using support vector machines (SVM).☆10Apr 15, 2026Updated 3 weeks ago
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆47Apr 29, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- The codebase of the OpenMS project☆589Updated this week
- The Amazon S3 Glacier Re:Freezer is a serverless solution that automatically copies entire Amazon S3 Glacier vault archives to a defined …☆20Jan 29, 2024Updated 2 years ago
- Collisional cross-section prediction for modified and multiconformational peptides☆13Apr 14, 2026Updated 3 weeks ago
- Recommendations to contenarized your bioinformatics software☆12May 30, 2018Updated 7 years ago
- Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.☆15Feb 17, 2025Updated last year
- Tumor Immune Single-cell Hub☆22Aug 13, 2020Updated 5 years ago
- Rescoring and spectral library generation pipeline for proteomics.☆56Updated this week