bigbio / pmultiqcLinks
A library for QC report based on MultiQC framework
☆26Updated last week
Alternatives and similar repositories for pmultiqc
Users that are interested in pmultiqc are comparing it to the libraries listed below
Sorting:
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆65Updated last week
- A Python interface to proteomics data repositories☆36Updated 7 months ago
- ☆67Updated last year
- Absolute quantification package based on quantms.io☆16Updated 4 months ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆83Updated 3 months ago
- PDV: an integrative proteomics data viewer☆59Updated 6 months ago
- Differential Expression Analysis tool box R lang package for omics data☆47Updated last month
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆123Updated last month
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆101Updated this week
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆43Updated this week
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Updated 11 months ago
- ☆40Updated last week
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆38Updated last year
- Python client for PRIDE Archive Rest API.☆29Updated last week
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆24Updated 7 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Updated 3 weeks ago
- A label free quantification tool.☆18Updated 2 weeks ago
- R package for functionally scoring phosphorylation sites☆21Updated 6 years ago
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 9 months ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆32Updated last week
- A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant☆47Updated 6 months ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆51Updated 2 years ago
- ☆24Updated 2 years ago
- ☆55Updated 4 years ago
- 🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data☆39Updated last year
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆31Updated last year
- pathway and network analysis for metabolomics☆43Updated last month
- Robust statistical inference for quantitative LC-MS proteomics☆33Updated 3 years ago
- Community-curated tutorials and datasets for ML in proteomics☆55Updated 3 months ago