cbielow / PTXQC
A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
☆43Updated 3 months ago
Alternatives and similar repositories for PTXQC:
Users that are interested in PTXQC are comparing it to the libraries listed below
- R package - MSstats☆81Updated this week
- Differential Expression Analysis tool box R lang package for omics data☆44Updated 3 weeks ago
- StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…☆12Updated 3 years ago
- The repo for LFQ-Analyst☆30Updated 8 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆42Updated this week
- Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package☆36Updated 11 months ago
- Access Orbitrap data in R lang using C# .NET assembly - bioconductor package☆56Updated 4 months ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆22Updated 2 weeks ago
- Report processing and protein quantification for MS-based proteomics☆42Updated last year
- Quantitative features for mass spectrometry data☆27Updated 2 weeks ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆27Updated last year
- Robust statistical inference for quantitative LC-MS proteomics☆33Updated 2 years ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆84Updated last week
- This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…☆45Updated 2 months ago
- ☆24Updated 2 years ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆24Updated 4 months ago
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆36Updated last month
- Picotti lab data analysis package.☆62Updated 3 weeks ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆94Updated last year
- An modular and extensible app for visualization of mass spectrometry data and optimization of data acquisition.☆25Updated last month
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆29Updated last month
- TimsR: Easy access to timsTOF Pro data from R.☆10Updated 3 years ago
- Base Classes and Functions for Mass Spectrometry and Proteomics☆131Updated last week
- A Comet-based, best practices proteomics pipeline.☆36Updated last year
- ☆55Updated 4 years ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆30Updated last month
- ☆12Updated 3 years ago
- PDV: an integrative proteomics data viewer☆46Updated last week
- ☆10Updated 2 years ago
- ☆58Updated 11 months ago